These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

124 related articles for article (PubMed ID: 16434137)

  • 1. GINsim: a software suite for the qualitative modelling, simulation and analysis of regulatory networks.
    Gonzalez AG; Naldi A; Sánchez L; Thieffry D; Chaouiya C
    Biosystems; 2006 May; 84(2):91-100. PubMed ID: 16434137
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Logical modelling of regulatory networks with GINsim 2.3.
    Naldi A; Berenguier D; Fauré A; Lopez F; Thieffry D; Chaouiya C
    Biosystems; 2009 Aug; 97(2):134-9. PubMed ID: 19426782
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Qualitative modelling of regulated metabolic pathways: application to the tryptophan biosynthesis in E.coli.
    Simão E; Remy E; Thieffry D; Chaouiya C
    Bioinformatics; 2005 Sep; 21 Suppl 2():ii190-6. PubMed ID: 16204102
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Logical modelling of the role of the Hh pathway in the patterning of the Drosophila wing disc.
    González A; Chaouiya C; Thieffry D
    Bioinformatics; 2008 Aug; 24(16):i234-40. PubMed ID: 18689831
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Logical modelling of gene regulatory networks with GINsim.
    Chaouiya C; Naldi A; Thieffry D
    Methods Mol Biol; 2012; 804():463-79. PubMed ID: 22144167
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Qualitative simulation of genetic regulatory networks using piecewise-linear models.
    De Jong H; Gouzé JL; Hernandez C; Page M; Sari T; Geiselmann J
    Bull Math Biol; 2004 Mar; 66(2):301-40. PubMed ID: 14871568
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Dynamical analysis of a generic Boolean model for the control of the mammalian cell cycle.
    Fauré A; Naldi A; Chaouiya C; Thieffry D
    Bioinformatics; 2006 Jul; 22(14):e124-31. PubMed ID: 16873462
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Ingeneue: a versatile tool for reconstituting genetic networks, with examples from the segment polarity network.
    Meir E; Munro EM; Odell GM; Von Dassow G
    J Exp Zool; 2002 Oct; 294(3):216-51. PubMed ID: 12362430
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A simulation study of the genetic regulatory hierarchy for butterfly eyespot focus determination.
    Evans TM; Marcus JM
    Evol Dev; 2006; 8(3):273-83. PubMed ID: 16686638
    [TBL] [Abstract][Full Text] [Related]  

  • 10. A structured approach for the engineering of biochemical network models, illustrated for signalling pathways.
    Breitling R; Gilbert D; Heiner M; Orton R
    Brief Bioinform; 2008 Sep; 9(5):404-21. PubMed ID: 18573813
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Graph-based methods for analysing networks in cell biology.
    Aittokallio T; Schwikowski B
    Brief Bioinform; 2006 Sep; 7(3):243-55. PubMed ID: 16880171
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Reconstruction of gene regulatory networks under the finite state linear model.
    Ruklisa D; Brazma A; Viksna J
    Genome Inform; 2005; 16(2):225-36. PubMed ID: 16901105
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Dynamical modeling and analysis of large cellular regulatory networks.
    Bérenguier D; Chaouiya C; Monteiro PT; Naldi A; Remy E; Thieffry D; Tichit L
    Chaos; 2013 Jun; 23(2):025114. PubMed ID: 23822512
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Ectopic expression of Tollo/Toll-8 antagonizes Dpp signaling and induces cell sorting in the Drosophila wing.
    Kim S; Chung S; Yoon J; Choi KW; Yim J
    Genesis; 2006 Nov; 44(11):541-9. PubMed ID: 17078066
    [TBL] [Abstract][Full Text] [Related]  

  • 15. The gap gene system of Drosophila melanogaster: model-fitting and validation.
    Perkins TJ
    Ann N Y Acad Sci; 2007 Dec; 1115():116-31. PubMed ID: 17934052
    [TBL] [Abstract][Full Text] [Related]  

  • 16. SysBioMed report: advancing systems biology for medical applications.
    Wolkenhauer O; Fell D; De Meyts P; Blüthgen N; Herzel H; Le Novère N; Höfer T; Schürrle K; van Leeuwen I
    IET Syst Biol; 2009 May; 3(3):131-6. PubMed ID: 19449974
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Synthetic tetracycline-inducible regulatory networks: computer-aided design of dynamic phenotypes.
    Sotiropoulos V; Kaznessis YN
    BMC Syst Biol; 2007 Jan; 1():7. PubMed ID: 17408514
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Model for the regulation of size in the wing imaginal disc of Drosophila.
    Aegerter-Wilmsen T; Aegerter CM; Hafen E; Basler K
    Mech Dev; 2007 Apr; 124(4):318-26. PubMed ID: 17293093
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Algorithmic and complexity results for decompositions of biological networks into monotone subsystems.
    DasGupta B; Enciso GA; Sontag E; Zhang Y
    Biosystems; 2007; 90(1):161-78. PubMed ID: 17188805
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Fast calculation of pairwise mutual information for gene regulatory network reconstruction.
    Qiu P; Gentles AJ; Plevritis SK
    Comput Methods Programs Biomed; 2009 May; 94(2):177-80. PubMed ID: 19167129
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.