These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

262 related articles for article (PubMed ID: 16446276)

  • 21. Rfold: an exact algorithm for computing local base pairing probabilities.
    Kiryu H; Kin T; Asai K
    Bioinformatics; 2008 Feb; 24(3):367-73. PubMed ID: 18056736
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Detection of 3D atomic similarities and their use in the discrimination of small molecule protein-binding sites.
    Najmanovich R; Kurbatova N; Thornton J
    Bioinformatics; 2008 Aug; 24(16):i105-11. PubMed ID: 18689810
    [TBL] [Abstract][Full Text] [Related]  

  • 23. MASTR: multiple alignment and structure prediction of non-coding RNAs using simulated annealing.
    Lindgreen S; Gardner PP; Krogh A
    Bioinformatics; 2007 Dec; 23(24):3304-11. PubMed ID: 18006551
    [TBL] [Abstract][Full Text] [Related]  

  • 24. RNA structure alignment by a unit-vector approach.
    Capriotti E; Marti-Renom MA
    Bioinformatics; 2008 Aug; 24(16):i112-8. PubMed ID: 18689811
    [TBL] [Abstract][Full Text] [Related]  

  • 25. INFO-RNA--a server for fast inverse RNA folding satisfying sequence constraints.
    Busch A; Backofen R
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W310-3. PubMed ID: 17452349
    [TBL] [Abstract][Full Text] [Related]  

  • 26. RNA tertiary structure determination: NOE pathways construction by tabu search.
    Blazewicz J; Szachniuk M; Wojtowicz A
    Bioinformatics; 2005 May; 21(10):2356-61. PubMed ID: 15731205
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Influence of mRNA self-structure on hybridization: computational tools for antisense sequence selection.
    Toschi N
    Methods; 2000 Nov; 22(3):261-9. PubMed ID: 11071822
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Prediction of siRNA knockdown efficiency using artificial neural network models.
    Ge G; Wong GW; Luo B
    Biochem Biophys Res Commun; 2005 Oct; 336(2):723-8. PubMed ID: 16153609
    [TBL] [Abstract][Full Text] [Related]  

  • 29. SCARNA: fast and accurate structural alignment of RNA sequences by matching fixed-length stem fragments.
    Tabei Y; Tsuda K; Kin T; Asai K
    Bioinformatics; 2006 Jul; 22(14):1723-9. PubMed ID: 16690634
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Prediction of Ras-effector interactions using position energy matrices.
    Kiel C; Serrano L
    Bioinformatics; 2007 Sep; 23(17):2226-30. PubMed ID: 17599936
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Minimum sequence requirements for selective RNA-ligand binding: a molecular mechanics algorithm using molecular dynamics and free-energy techniques.
    Anderson PC; Mecozzi S
    J Comput Chem; 2006 Nov; 27(14):1631-40. PubMed ID: 16900493
    [TBL] [Abstract][Full Text] [Related]  

  • 32. A systematic analysis of the effect of target RNA structure on RNA interference.
    Westerhout EM; Berkhout B
    Nucleic Acids Res; 2007; 35(13):4322-30. PubMed ID: 17576691
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Murlet: a practical multiple alignment tool for structural RNA sequences.
    Kiryu H; Tabei Y; Kin T; Asai K
    Bioinformatics; 2007 Jul; 23(13):1588-98. PubMed ID: 17459961
    [TBL] [Abstract][Full Text] [Related]  

  • 34. How do RNA folding algorithms work?
    Eddy SR
    Nat Biotechnol; 2004 Nov; 22(11):1457-8. PubMed ID: 15529172
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Identification of sequence motifs significantly associated with antisense activity.
    McQuisten KA; Peek AS
    BMC Bioinformatics; 2007 Jun; 8():184. PubMed ID: 17555590
    [TBL] [Abstract][Full Text] [Related]  

  • 36. The effect of U1 snRNA binding free energy on the selection of 5' splice sites.
    Bi J; Xia H; Li F; Zhang X; Li Y
    Biochem Biophys Res Commun; 2005 Jul; 333(1):64-9. PubMed ID: 15936716
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Aligning two RNA secondary structures with l-block.
    Wang Z; Tillier ER
    Biomol Eng; 2007 Sep; 24(3):321-6. PubMed ID: 17502167
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Mechanistic insights aid computational short interfering RNA design.
    Boese Q; Leake D; Reynolds A; Read S; Scaringe SA; Marshall WS; Khvorova A
    Methods Enzymol; 2005; 392():73-96. PubMed ID: 15644176
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Multiple structural alignment and clustering of RNA sequences.
    Torarinsson E; Havgaard JH; Gorodkin J
    Bioinformatics; 2007 Apr; 23(8):926-32. PubMed ID: 17324941
    [TBL] [Abstract][Full Text] [Related]  

  • 40. TargetFinder: a software for antisense oligonucleotide target site selection based on MAST and secondary structures of target mRNA.
    Bo X; Wang S
    Bioinformatics; 2005 Apr; 21(8):1401-2. PubMed ID: 15598838
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 14.