BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

291 related articles for article (PubMed ID: 16448021)

  • 1. High-throughput 3D structural homology detection via NMR resonance assignment.
    Langmead CJ; Donald BR
    Proc IEEE Comput Syst Bioinform Conf; 2004; ():278-89. PubMed ID: 16448021
    [TBL] [Abstract][Full Text] [Related]  

  • 2. 3D structural homology detection via unassigned residual dipolar couplings.
    Langmead CJ; Donald BR
    Proc IEEE Comput Soc Bioinform Conf; 2003; 2():209-17. PubMed ID: 16452795
    [TBL] [Abstract][Full Text] [Related]  

  • 3. A Hausdorff-based NOE assignment algorithm using protein backbone determined from residual dipolar couplings and rotamer patterns.
    Zeng J; Tripathy C; Zhou P; Donald BR
    Comput Syst Bioinformatics Conf; 2008; 7():169-81. PubMed ID: 19642278
    [TBL] [Abstract][Full Text] [Related]  

  • 4. A polynomial-time nuclear vector replacement algorithm for automated NMR resonance assignments.
    Langmead CJ; Yan A; Lilien R; Wang L; Donald BR
    J Comput Biol; 2004; 11(2-3):277-98. PubMed ID: 15285893
    [TBL] [Abstract][Full Text] [Related]  

  • 5. SimShift: identifying structural similarities from NMR chemical shifts.
    Ginzinger SW; Fischer J
    Bioinformatics; 2006 Feb; 22(4):460-5. PubMed ID: 16317071
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Automated protein NMR resonance assignments.
    Wan X; Xu D; Slupsky CM; Lin G
    Proc IEEE Comput Soc Bioinform Conf; 2003; 2():197-208. PubMed ID: 16452794
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Detection of 3D atomic similarities and their use in the discrimination of small molecule protein-binding sites.
    Najmanovich R; Kurbatova N; Thornton J
    Bioinformatics; 2008 Aug; 24(16):i105-11. PubMed ID: 18689810
    [TBL] [Abstract][Full Text] [Related]  

  • 8. An algebraic geometry approach to protein structure determination from NMR data.
    Wang L; Mettu RR; Donald BR
    Proc IEEE Comput Syst Bioinform Conf; 2005; ():235-46. PubMed ID: 16447981
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Evaluating the usefulness of protein structure models for molecular replacement.
    Giorgetti A; Raimondo D; Miele AE; Tramontano A
    Bioinformatics; 2005 Sep; 21 Suppl 2():ii72-6. PubMed ID: 16204129
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Improving homology models for protein-ligand binding sites.
    Kauffman C; Rangwala H; Karypis G
    Comput Syst Bioinformatics Conf; 2008; 7():211-22. PubMed ID: 19642282
    [TBL] [Abstract][Full Text] [Related]  

  • 11. FAMS and FAMSBASE for protein structure.
    Umeyama H; Iwadate M
    Curr Protoc Bioinformatics; 2004 Feb; Chapter 5():Unit5.2. PubMed ID: 18428727
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Protein backbone angle prediction with machine learning approaches.
    Kuang R; Leslie CS; Yang AS
    Bioinformatics; 2004 Jul; 20(10):1612-21. PubMed ID: 14988121
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Modeling protein loops with knowledge-based prediction of sequence-structure alignment.
    Peng HP; Yang AS
    Bioinformatics; 2007 Nov; 23(21):2836-42. PubMed ID: 17827204
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Support Vector Machine-based classification of protein folds using the structural properties of amino acid residues and amino acid residue pairs.
    Shamim MT; Anwaruddin M; Nagarajaram HA
    Bioinformatics; 2007 Dec; 23(24):3320-7. PubMed ID: 17989092
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Fast protein fold estimation from NMR-derived distance restraints.
    Angyán AF; Perczel A; Pongor S; Gáspári Z
    Bioinformatics; 2008 Jan; 24(2):272-5. PubMed ID: 18003647
    [TBL] [Abstract][Full Text] [Related]  

  • 16. A simple genetic algorithm for the optimization of multidomain protein homology models driven by NMR residual dipolar coupling and small angle X-ray scattering data.
    Mareuil F; Sizun C; Perez J; Schoenauer M; Lallemand JY; Bontems F
    Eur Biophys J; 2007 Dec; 37(1):95-104. PubMed ID: 17522855
    [TBL] [Abstract][Full Text] [Related]  

  • 17. An efficient randomized algorithm for contact-based NMR backbone resonance assignment.
    Kamisetty H; Bailey-Kellogg C; Pandurangan G
    Bioinformatics; 2006 Jan; 22(2):172-80. PubMed ID: 16287932
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Prediction of Ras-effector interactions using position energy matrices.
    Kiel C; Serrano L
    Bioinformatics; 2007 Sep; 23(17):2226-30. PubMed ID: 17599936
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Motif-based protein ranking by network propagation.
    Kuang R; Weston J; Noble WS; Leslie C
    Bioinformatics; 2005 Oct; 21(19):3711-8. PubMed ID: 16076885
    [TBL] [Abstract][Full Text] [Related]  

  • 20. VISTAL--a new 2D visualization tool of protein 3D structural alignments.
    Kolodny R; Honig B
    Bioinformatics; 2006 Sep; 22(17):2166-7. PubMed ID: 16837525
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 15.