These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

209 related articles for article (PubMed ID: 16452117)

  • 1. Recombination estimation under complex evolutionary models with the coalescent composite-likelihood method.
    Carvajal-Rodríguez A; Crandall KA; Posada D
    Mol Biol Evol; 2006 Apr; 23(4):817-27. PubMed ID: 16452117
    [TBL] [Abstract][Full Text] [Related]  

  • 2. GENOMEPOP: a program to simulate genomes in populations.
    Carvajal-Rodríguez A
    BMC Bioinformatics; 2008 Apr; 9():223. PubMed ID: 18447924
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Effect of recombination on the accuracy of the likelihood method for detecting positive selection at amino acid sites.
    Anisimova M; Nielsen R; Yang Z
    Genetics; 2003 Jul; 164(3):1229-36. PubMed ID: 12871927
    [TBL] [Abstract][Full Text] [Related]  

  • 4. A coalescent-based method for detecting and estimating recombination from gene sequences.
    McVean G; Awadalla P; Fearnhead P
    Genetics; 2002 Mar; 160(3):1231-41. PubMed ID: 11901136
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Consistency of estimators of the population-scaled recombination rate.
    Fearnhead P
    Theor Popul Biol; 2003 Aug; 64(1):67-79. PubMed ID: 12804872
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Recodon: coalescent simulation of coding DNA sequences with recombination, migration and demography.
    Arenas M; Posada D
    BMC Bioinformatics; 2007 Nov; 8():458. PubMed ID: 18028540
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Coalescent Inference Using Serially Sampled, High-Throughput Sequencing Data from Intrahost HIV Infection.
    Dialdestoro K; Sibbesen JA; Maretty L; Raghwani J; Gall A; Kellam P; Pybus OG; Hein J; Jenkins PA
    Genetics; 2016 Apr; 202(4):1449-72. PubMed ID: 26857628
    [TBL] [Abstract][Full Text] [Related]  

  • 8. The molecular population genetics of HIV-1 group O.
    Lemey P; Pybus OG; Rambaut A; Drummond AJ; Robertson DL; Roques P; Worobey M; Vandamme AM
    Genetics; 2004 Jul; 167(3):1059-68. PubMed ID: 15280223
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A composite-likelihood approach for detecting directional selection from DNA sequence data.
    Zhu L; Bustamante CD
    Genetics; 2005 Jul; 170(3):1411-21. PubMed ID: 15879513
    [TBL] [Abstract][Full Text] [Related]  

  • 10. A comparison of three estimators of the population-scaled recombination rate: accuracy and robustness.
    Smith NG; Fearnhead P
    Genetics; 2005 Dec; 171(4):2051-62. PubMed ID: 15956675
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Coestimation of recombination, substitution and molecular adaptation rates by approximate Bayesian computation.
    Lopes JS; Arenas M; Posada D; Beaumont MA
    Heredity (Edinb); 2014 Mar; 112(3):255-64. PubMed ID: 24149652
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Robust inference of positive selection from recombining coding sequences.
    Scheffler K; Martin DP; Seoighe C
    Bioinformatics; 2006 Oct; 22(20):2493-9. PubMed ID: 16895925
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Likelihood-based clustering (LiBaC) for codon models, a method for grouping sites according to similarities in the underlying process of evolution.
    Bao L; Gu H; Dunn KA; Bielawski JP
    Mol Biol Evol; 2008 Sep; 25(9):1995-2007. PubMed ID: 18586695
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Comparing likelihood and Bayesian coalescent estimation of population parameters.
    Kuhner MK; Smith LP
    Genetics; 2007 Jan; 175(1):155-65. PubMed ID: 16510781
    [TBL] [Abstract][Full Text] [Related]  

  • 15. A simple and robust statistical test for detecting the presence of recombination.
    Bruen TC; Philippe H; Bryant D
    Genetics; 2006 Apr; 172(4):2665-81. PubMed ID: 16489234
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Stopping-time resampling and population genetic inference under coalescent models.
    Jenkins PA
    Stat Appl Genet Mol Biol; 2012 Jan; 11(1):Article 9. PubMed ID: 22499685
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Molecular clock-like evolution of human immunodeficiency virus type 1.
    Liu Y; Nickle DC; Shriner D; Jensen MA; Learn GH; Mittler JE; Mullins JI
    Virology; 2004 Nov; 329(1):101-8. PubMed ID: 15476878
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Incorporating experimental design and error into coalescent/mutation models of population history.
    Knudsen B; Miyamoto MM
    Genetics; 2007 Aug; 176(4):2335-42. PubMed ID: 17565962
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Estimating recombination rates from population genetic data.
    Fearnhead P; Donnelly P
    Genetics; 2001 Nov; 159(3):1299-318. PubMed ID: 11729171
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Exact computation of coalescent likelihood for panmictic and subdivided populations under the infinite sites model.
    Wu Y
    IEEE/ACM Trans Comput Biol Bioinform; 2010; 7(4):611-8. PubMed ID: 21030730
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.