These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
8. High-throughput modeling and analysis of protein structural dynamics. Liu X; Karimi HA Brief Bioinform; 2007 Nov; 8(6):432-45. PubMed ID: 17485424 [TBL] [Abstract][Full Text] [Related]
9. PTGL--a web-based database application for protein topologies. May P; Barthel S; Koch I Bioinformatics; 2004 Nov; 20(17):3277-9. PubMed ID: 15217820 [TBL] [Abstract][Full Text] [Related]
10. Adding some SPICE to DAS. Prlić A; Down TA; Hubbard TJ Bioinformatics; 2005 Sep; 21 Suppl 2(Suppl 2):ii40-1. PubMed ID: 16204122 [TBL] [Abstract][Full Text] [Related]
11. VISTAL--a new 2D visualization tool of protein 3D structural alignments. Kolodny R; Honig B Bioinformatics; 2006 Sep; 22(17):2166-7. PubMed ID: 16837525 [TBL] [Abstract][Full Text] [Related]
12. PDB-UF: database of predicted enzymatic functions for unannotated protein structures from structural genomics. von Grotthuss M; Plewczynski D; Ginalski K; Rychlewski L; Shakhnovich EI BMC Bioinformatics; 2006 Feb; 7():53. PubMed ID: 16460560 [TBL] [Abstract][Full Text] [Related]
13. Multiple Alignment of protein structures and sequences for VMD. Eargle J; Wright D; Luthey-Schulten Z Bioinformatics; 2006 Feb; 22(4):504-6. PubMed ID: 16339280 [TBL] [Abstract][Full Text] [Related]
15. The InterPro database and tools for protein domain analysis. Mulder NJ; Apweiler R Curr Protoc Bioinformatics; 2008 Mar; Chapter 2():Unit 2.7. PubMed ID: 18428686 [TBL] [Abstract][Full Text] [Related]
16. Using Dali for structural comparison of proteins. Holm L; Kääriäinen S; Wilton C; Plewczynski D Curr Protoc Bioinformatics; 2006 Jul; Chapter 5():Unit 5.5. PubMed ID: 18428766 [TBL] [Abstract][Full Text] [Related]
17. DBAli tools: mining the protein structure space. Marti-Renom MA; Pieper U; Madhusudhan MS; Rossi A; Eswar N; Davis FP; Al-Shahrour F; Dopazo J; Sali A Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W393-7. PubMed ID: 17478513 [TBL] [Abstract][Full Text] [Related]
18. PSIbase: a database of Protein Structural Interactome map (PSIMAP). Gong S; Yoon G; Jang I; Bolser D; Dafas P; Schroeder M; Choi H; Cho Y; Han K; Lee S; Choi H; Lappe M; Holm L; Kim S; Oh D; Bhak J Bioinformatics; 2005 May; 21(10):2541-3. PubMed ID: 15749693 [TBL] [Abstract][Full Text] [Related]
19. CoC: a database of universally conserved residues in protein folds. Donald JE; Hubner IA; Rotemberg VM; Shakhnovich EI; Mirny LA Bioinformatics; 2005 May; 21(10):2539-40. PubMed ID: 15746286 [TBL] [Abstract][Full Text] [Related]