126 related articles for article (PubMed ID: 16455748)
21. Method for identifying transcription factor binding sites in yeast.
Tsai HK; Huang GT; Chou MY; Lu HH; Li WH
Bioinformatics; 2006 Jul; 22(14):1675-81. PubMed ID: 16644789
[TBL] [Abstract][Full Text] [Related]
22. Detection of generic spaced motifs using submotif pattern mining.
Wijaya E; Rajaraman K; Yiu SM; Sung WK
Bioinformatics; 2007 Jun; 23(12):1476-85. PubMed ID: 17483509
[TBL] [Abstract][Full Text] [Related]
23. TFBScluster: a resource for the characterization of transcriptional regulatory networks.
Donaldson IJ; Chapman M; Göttgens B
Bioinformatics; 2005 Jul; 21(13):3058-9. PubMed ID: 15855248
[TBL] [Abstract][Full Text] [Related]
24. A profile-based deterministic sequential Monte Carlo algorithm for motif discovery.
Liang KC; Wang X; Anastassiou D
Bioinformatics; 2008 Jan; 24(1):46-55. PubMed ID: 18024972
[TBL] [Abstract][Full Text] [Related]
25. Predicting transcription factor binding sites using local over-representation and comparative genomics.
Defrance M; Touzet H
BMC Bioinformatics; 2006 Aug; 7():396. PubMed ID: 16945132
[TBL] [Abstract][Full Text] [Related]
26. RankMotif++: a motif-search algorithm that accounts for relative ranks of K-mers in binding transcription factors.
Chen X; Hughes TR; Morris Q
Bioinformatics; 2007 Jul; 23(13):i72-9. PubMed ID: 17646348
[TBL] [Abstract][Full Text] [Related]
27. Identification of DNA regulatory motifs using Bayesian variable selection.
Tadesse MG; Vannucci M; Liò P
Bioinformatics; 2004 Nov; 20(16):2553-61. PubMed ID: 15117754
[TBL] [Abstract][Full Text] [Related]
28. Homology search for genes.
Cui X; Vinar T; Brejová B; Shasha D; Li M
Bioinformatics; 2007 Jul; 23(13):i97-103. PubMed ID: 17646351
[TBL] [Abstract][Full Text] [Related]
29. Apples to apples: improving the performance of motif finders and their significance analysis in the Twilight Zone.
Ng P; Nagarajan N; Jones N; Keich U
Bioinformatics; 2006 Jul; 22(14):e393-401. PubMed ID: 16873498
[TBL] [Abstract][Full Text] [Related]
30. SCOPE: a web server for practical de novo motif discovery.
Carlson JM; Chakravarty A; DeZiel CE; Gross RH
Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W259-64. PubMed ID: 17485471
[TBL] [Abstract][Full Text] [Related]
31. An equilibrium partitioning model connecting gene expression and cis-motif content.
Mellor J; DeLisi C
Bioinformatics; 2006 Jul; 22(14):e368-74. PubMed ID: 16873495
[TBL] [Abstract][Full Text] [Related]
32. Phylogeny based discovery of regulatory elements.
Gertz J; Fay JC; Cohen BA
BMC Bioinformatics; 2006 May; 7():266. PubMed ID: 16716228
[TBL] [Abstract][Full Text] [Related]
33. cWINNOWER algorithm for finding fuzzy DNA motifs.
Liang S
Proc IEEE Comput Soc Bioinform Conf; 2003; 2():260-5. PubMed ID: 16452801
[TBL] [Abstract][Full Text] [Related]
34. Identifying cis-regulatory modules by combining comparative and compositional analysis of DNA.
Pierstorff N; Bergman CM; Wiehe T
Bioinformatics; 2006 Dec; 22(23):2858-64. PubMed ID: 17032682
[TBL] [Abstract][Full Text] [Related]
35. Discriminative discovery of transcription factor binding sites from location data.
Kawada Y; Sakakibara Y
Proc IEEE Comput Syst Bioinform Conf; 2005; ():86-9. PubMed ID: 16447966
[TBL] [Abstract][Full Text] [Related]
36. Identification of co-regulated genes through Bayesian clustering of predicted regulatory binding sites.
Qin ZS; McCue LA; Thompson W; Mayerhofer L; Lawrence CE; Liu JS
Nat Biotechnol; 2003 Apr; 21(4):435-9. PubMed ID: 12627170
[TBL] [Abstract][Full Text] [Related]
37. A Gibbs sampler for identification of symmetrically structured, spaced DNA motifs with improved estimation of the signal length.
Favorov AV; Gelfand MS; Gerasimova AV; Ravcheev DA; Mironov AA; Makeev VJ
Bioinformatics; 2005 May; 21(10):2240-5. PubMed ID: 15728117
[TBL] [Abstract][Full Text] [Related]
38. ARTS: accurate recognition of transcription starts in human.
Sonnenburg S; Zien A; Rätsch G
Bioinformatics; 2006 Jul; 22(14):e472-80. PubMed ID: 16873509
[TBL] [Abstract][Full Text] [Related]
39. SITEBLAST--rapid and sensitive local alignment of genomic sequences employing motif anchors.
Michael M; Dieterich C; Vingron M
Bioinformatics; 2005 May; 21(9):2093-4. PubMed ID: 15598827
[TBL] [Abstract][Full Text] [Related]
40. Regulatory motif finding by logic regression.
Keles S; van der Laan MJ; Vulpe C
Bioinformatics; 2004 Nov; 20(16):2799-811. PubMed ID: 15166027
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
