BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

153 related articles for article (PubMed ID: 16471567)

  • 21. How well does Poisson-Boltzmann implicit solvent agree with explicit solvent? A quantitative analysis.
    Tan C; Yang L; Luo R
    J Phys Chem B; 2006 Sep; 110(37):18680-7. PubMed ID: 16970499
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Determination of Hydrophobic Lengths of Membrane Proteins with the HDGB Implicit Membrane Model.
    Dutagaci B; Feig M
    J Chem Inf Model; 2017 Dec; 57(12):3032-3042. PubMed ID: 29155578
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Computer simulations and theory of protein translocation.
    Makarov DE
    Acc Chem Res; 2009 Feb; 42(2):281-9. PubMed ID: 19072704
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Packing of transmembrane helices in bacteriorhodopsin folding: structure and thermodynamics.
    Chen CC; Wei CC; Sun YC; Chen CM
    J Struct Biol; 2008 May; 162(2):237-47. PubMed ID: 18262435
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Membrane adsorption, folding, insertion and translocation of synthetic trans-membrane peptides.
    Ulmschneider MB; Ulmschneider JP
    Mol Membr Biol; 2008 Apr; 25(3):245-57. PubMed ID: 18428040
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Prediction of the mutation-induced change in thermodynamic stabilities of membrane proteins from free energy simulations.
    Park H; Lee S
    Biophys Chem; 2005 Apr; 114(2-3):191-7. PubMed ID: 15829352
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Incorporating receptor flexibility in the molecular design of protein interfaces.
    Li L; Liang S; Pilcher MM; Meroueh SO
    Protein Eng Des Sel; 2009 Sep; 22(9):575-86. PubMed ID: 19643976
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Thermodynamics and folding pathways of trpzip2: an accelerated molecular dynamics simulation study.
    Yang L; Shao Q; Gao YQ
    J Phys Chem B; 2009 Jan; 113(3):803-8. PubMed ID: 19113829
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Structural characterization of an integral membrane protein in its natural lipid environment by oxidative methionine labeling and mass spectrometry.
    Pan Y; Stocks BB; Brown L; Konermann L
    Anal Chem; 2009 Jan; 81(1):28-35. PubMed ID: 19055344
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Role of ions on structure and stability of a synthetic gramicidin ion channel in solution. A molecular dynamics study.
    Morra G; Koert U; Knapp EW
    J Phys Chem B; 2005 May; 109(20):10441-8. PubMed ID: 16852265
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Self-assembling dipeptides: conformational sampling in solvent-free coarse-grained simulation.
    Villa A; Peter C; van der Vegt NF
    Phys Chem Chem Phys; 2009 Mar; 11(12):2077-86. PubMed ID: 19280018
    [TBL] [Abstract][Full Text] [Related]  

  • 32. A test of implicit solvent models on the folding simulation of the GB1 peptide.
    Shao Q; Yang L; Gao YQ
    J Chem Phys; 2009 May; 130(19):195104. PubMed ID: 19466868
    [TBL] [Abstract][Full Text] [Related]  

  • 33. The use of a generalized born model for the analysis of protein conformational transitions: a comparative study with explicit solvent simulations for chemotaxis Y protein (CheY).
    Formaneck MS; Cui Q
    J Comput Chem; 2006 Dec; 27(16):1923-43. PubMed ID: 17019722
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Coarse-grained protein molecular dynamics simulations.
    Derreumaux P; Mousseau N
    J Chem Phys; 2007 Jan; 126(2):025101. PubMed ID: 17228975
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Specificity of helix packing in transmembrane dimer of the cell death factor BNIP3: a molecular modeling study.
    Vereshaga YA; Volynsky PE; Pustovalova JE; Nolde DE; Arseniev AS; Efremov RG
    Proteins; 2007 Nov; 69(2):309-25. PubMed ID: 17600828
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Balancing an accurate representation of the molecular surface in generalized born formalisms with integrator stability in molecular dynamics simulations.
    Chocholousová J; Feig M
    J Comput Chem; 2006 Apr; 27(6):719-29. PubMed ID: 16518883
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Modeling and molecular dynamics simulation of the human gonadotropin-releasing hormone receptor in a lipid bilayer.
    Jardón-Valadez E; Ulloa-Aguirre A; Piñeiro A
    J Phys Chem B; 2008 Aug; 112(34):10704-13. PubMed ID: 18680336
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Mapping the structure of an integral membrane protein under semi-denaturing conditions by laser-induced oxidative labeling and mass spectrometry.
    Pan Y; Brown L; Konermann L
    J Mol Biol; 2009 Dec; 394(5):968-81. PubMed ID: 19804782
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Implicit and explicit solvent models for the simulation of a single polymer chain in solution: Lattice Boltzmann versus Brownian dynamics.
    Pham TT; Schiller UD; Prakash JR; Dünweg B
    J Chem Phys; 2009 Oct; 131(16):164114. PubMed ID: 19894934
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Molecular dynamics simulations of folding processes of a beta-hairpin in an implicit solvent.
    Chen C; Xiao Y
    Phys Biol; 2006 Aug; 3(3):161-71. PubMed ID: 17021380
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 8.