These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
278 related articles for article (PubMed ID: 16495231)
1. Statistical and Bayesian approaches to RNA secondary structure prediction. Ding Y RNA; 2006 Mar; 12(3):323-31. PubMed ID: 16495231 [TBL] [Abstract][Full Text] [Related]
2. Evaluation of a sophisticated SCFG design for RNA secondary structure prediction. Nebel ME; Scheid A Theory Biosci; 2011 Dec; 130(4):313-36. PubMed ID: 22135038 [TBL] [Abstract][Full Text] [Related]
3. Evaluating the effect of disturbed ensemble distributions on SCFG based statistical sampling of RNA secondary structures. Scheid A; Nebel ME BMC Bioinformatics; 2012 Jul; 13():159. PubMed ID: 22776037 [TBL] [Abstract][Full Text] [Related]
4. CONTRAfold: RNA secondary structure prediction without physics-based models. Do CB; Woods DA; Batzoglou S Bioinformatics; 2006 Jul; 22(14):e90-8. PubMed ID: 16873527 [TBL] [Abstract][Full Text] [Related]
5. Improved prediction of RNA secondary structure by integrating the free energy model with restraints derived from experimental probing data. Wu Y; Shi B; Ding X; Liu T; Hu X; Yip KY; Yang ZR; Mathews DH; Lu ZJ Nucleic Acids Res; 2015 Sep; 43(15):7247-59. PubMed ID: 26170232 [TBL] [Abstract][Full Text] [Related]
12. An algorithm for computing nucleic acid base-pairing probabilities including pseudoknots. Dirks RM; Pierce NA J Comput Chem; 2004 Jul; 25(10):1295-304. PubMed ID: 15139042 [TBL] [Abstract][Full Text] [Related]
13. A set of nearest neighbor parameters for predicting the enthalpy change of RNA secondary structure formation. Lu ZJ; Turner DH; Mathews DH Nucleic Acids Res; 2006; 34(17):4912-24. PubMed ID: 16982646 [TBL] [Abstract][Full Text] [Related]
14. A partition function algorithm for nucleic acid secondary structure including pseudoknots. Dirks RM; Pierce NA J Comput Chem; 2003 Oct; 24(13):1664-77. PubMed ID: 12926009 [TBL] [Abstract][Full Text] [Related]
15. An efficient algorithm for upper bound on the partition function of nucleic acids. Chitsaz H; Forouzmand E; Haffari G J Comput Biol; 2013 Jul; 20(7):486-94. PubMed ID: 23829650 [TBL] [Abstract][Full Text] [Related]