397 related articles for article (PubMed ID: 16503660)
1. DNA intramolecular triplexes containing dT --> dU substitutions: unfolding energetics and ligand binding.
Soto AM; Rentzeperis D; Shikiya R; Alonso M; Marky LA
Biochemistry; 2006 Mar; 45(9):3051-9. PubMed ID: 16503660
[TBL] [Abstract][Full Text] [Related]
2. Calorimetric unfolding of intramolecular triplexes: length dependence and incorporation of single AT --> TA substitutions in the duplex domain.
Shikiya R; Marky LA
J Phys Chem B; 2005 Sep; 109(38):18177-83. PubMed ID: 16853334
[TBL] [Abstract][Full Text] [Related]
3. Drug binding to higher ordered DNA structures: netropsin complexation with a nucleic acid triple helix.
Park YW; Breslauer KJ
Proc Natl Acad Sci U S A; 1992 Jul; 89(14):6653-7. PubMed ID: 1321445
[TBL] [Abstract][Full Text] [Related]
4. Binding of netropsin to several DNA constructs: evidence for at least two different 1:1 complexes formed from an -AATT-containing ds-DNA construct and a single minor groove binding ligand.
Freyer MW; Buscaglia R; Cashman D; Hyslop S; Wilson WD; Chaires JB; Lewis EA
Biophys Chem; 2007 Mar; 126(1-3):186-96. PubMed ID: 16837123
[TBL] [Abstract][Full Text] [Related]
5. Interaction of minor groove ligands with G-quadruplexes: thermodynamic contributions of the number of quartets, T-U substitutions, and conformation.
Prislan I; Khutsishvili I; Marky LA
Biochimie; 2011 Aug; 93(8):1341-50. PubMed ID: 21684318
[TBL] [Abstract][Full Text] [Related]
6. Solid-phase synthesis of positively charged deoxynucleic guanidine (DNG) tethering a Hoechst 33258 analogue: triplex and duplex stabilization by simultaneous minor groove binding.
Reddy PM; Bruice TC
J Am Chem Soc; 2004 Mar; 126(12):3736-47. PubMed ID: 15038726
[TBL] [Abstract][Full Text] [Related]
7. Energetic diversity of DNA minor-groove recognition by small molecules displayed through some model ligand-DNA systems.
Lah J; Vesnaver G
J Mol Biol; 2004 Sep; 342(1):73-89. PubMed ID: 15313608
[TBL] [Abstract][Full Text] [Related]
8. Structure-dependent effects of minor groove binders on the DNA triple helix motif poly(dA).2poly(dT): influence of antitumoractive nonintercalative bisquaternary ammonium heterocycles.
Förtsch I; Baguley B; Zimmer C
Anticancer Drug Des; 1998 Jul; 13(5):417-29. PubMed ID: 9702208
[TBL] [Abstract][Full Text] [Related]
9. The thermodynamic contribution of the 5-methyl group of thymine in the two- and three-stranded complexes formed by poly(dU) and poly(dT) with poly(dA).
Ross PD; Howard FB
Biopolymers; 2003 Feb; 68(2):210-22. PubMed ID: 12548624
[TBL] [Abstract][Full Text] [Related]
10. Spectroscopic investigation of an intramolecular DNA triplex containing both G.G:C and T.A:T triads and its complex with netropsin.
Gondeau C; Maurizot JC; Durand M
J Biomol Struct Dyn; 1998 Jun; 15(6):1133-45. PubMed ID: 9669558
[TBL] [Abstract][Full Text] [Related]
11. Unfolding thermodynamics of DNA pyrimidine triplexes with different molecularities.
Lee HT; Arciniegas S; Marky LA
J Phys Chem B; 2008 Apr; 112(15):4833-40. PubMed ID: 18358029
[TBL] [Abstract][Full Text] [Related]
12. Unfolding thermodynamics of DNA intramolecular complexes involving joined triple- and double-helical motifs.
Khutsishvili I; Johnson S; Lee HT; Marky LA
Methods Enzymol; 2009; 466():477-502. PubMed ID: 21609873
[TBL] [Abstract][Full Text] [Related]
13. The interaction of intercalators and groove-binding agents with DNA triple-helical structures: the influence of ligand structure, DNA backbone modifications and sequence.
Wilson WD; Mizan S; Tanious FA; Yao S; Zon G
J Mol Recognit; 1994 Jun; 7(2):89-98. PubMed ID: 7826678
[TBL] [Abstract][Full Text] [Related]
14. Neomycin binding to Watson-Hoogsteen (W-H) DNA triplex groove: a model.
Arya DP; Micovic L; Charles I; Coffee RL; Willis B; Xue L
J Am Chem Soc; 2003 Apr; 125(13):3733-44. PubMed ID: 12656603
[TBL] [Abstract][Full Text] [Related]
15. Binding mode of [ruthenium(II) (1,10-phenanthroline)2L]2+ with poly (dT*dA-dT) triplex. Ligand size effect on third-strand stabilization.
Choi SD; Kim MS; Kim SK; Lincoln P; Tuite E; Nordén B
Biochemistry; 1997 Jan; 36(1):214-23. PubMed ID: 8993336
[TBL] [Abstract][Full Text] [Related]
16. Thermodynamic, kinetic, and conformational properties of a parallel intermolecular DNA triplex containing 5' and 3' junctions.
Asensio JL; Dosanjh HS; Jenkins TC; Lane AN
Biochemistry; 1998 Oct; 37(43):15188-98. PubMed ID: 9790683
[TBL] [Abstract][Full Text] [Related]
17. Circular dichroism and UV melting studies on formation of an intramolecular triplex containing parallel T*A:T and G*G:C triplets: netropsin complexation with the triplex.
Gondeau C; Maurizot JC; Durand M
Nucleic Acids Res; 1998 Nov; 26(21):4996-5003. PubMed ID: 9776765
[TBL] [Abstract][Full Text] [Related]
18. DNA oligonucleotide duplexes containing intramolecular platinated cross-links: energetics, hydration, sequence, and ionic effects.
Kankia BI; Soto AM; Burns N; Shikiya R; Tung CS; Marky LA
Biopolymers; 2002 Nov; 65(3):218-27. PubMed ID: 12228927
[TBL] [Abstract][Full Text] [Related]
19. Homooligomeric dA.dU and dA.dT sequences in parallel and antiparallel strand orientation: consequence of the 5-methyl groups on stability, structure and interaction with the minor groove binding drug Hoechst 33258.
Germann MW; Kalisch BW; van de Sande JH
J Biomol Struct Dyn; 1996 Jun; 13(6):953-62. PubMed ID: 8832378
[TBL] [Abstract][Full Text] [Related]
20. Impact of the third-strand orientation on the thermodynamic stability of the four-way DNA junction.
Makube N; Klump HH
Arch Biochem Biophys; 2001 Sep; 393(1):1-13. PubMed ID: 11516156
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
