These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

171 related articles for article (PubMed ID: 16524469)

  • 1. Discovering functional gene expression patterns in the metabolic network of Escherichia coli with wavelets transforms.
    König R; Schramm G; Oswald M; Seitz H; Sager S; Zapatka M; Reinelt G; Eils R
    BMC Bioinformatics; 2006 Mar; 7():119. PubMed ID: 16524469
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Using gene expression data and network topology to detect substantial pathways, clusters and switches during oxygen deprivation of Escherichia coli.
    Schramm G; Zapatka M; Eils R; König R
    BMC Bioinformatics; 2007 May; 8():149. PubMed ID: 17488495
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Gene expression analysis on biochemical networks using the Potts spin model.
    König R; Eils R
    Bioinformatics; 2004 Jul; 20(10):1500-5. PubMed ID: 15231542
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Fnr[4Fe-4S](2+) protein regulates the aidB gene expression in Escherichia coli cultured under anaerobic conditions.
    Vasilieva SV; Streltsova DA; Moshkovskaya EY; Sanina NA; Aldoshin SM
    Dokl Biochem Biophys; 2010; 433():179-82. PubMed ID: 20714851
    [No Abstract]   [Full Text] [Related]  

  • 5. Metabolic pathway analysis web service (Pathway Hunter Tool at CUBIC).
    Rahman SA; Advani P; Schunk R; Schrader R; Schomburg D
    Bioinformatics; 2005 Apr; 21(7):1189-93. PubMed ID: 15572476
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Decomposition of metabolic network into functional modules based on the global connectivity structure of reaction graph.
    Ma HW; Zhao XM; Yuan YJ; Zeng AP
    Bioinformatics; 2004 Aug; 20(12):1870-6. PubMed ID: 15037506
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Transition of an Anaerobic Escherichia coli Culture to Aerobiosis: Balancing mRNA and Protein Levels in a Demand-Directed Dynamic Flux Balance Analysis.
    von Wulffen J; ; Sawodny O; Feuer R
    PLoS One; 2016; 11(7):e0158711. PubMed ID: 27384956
    [TBL] [Abstract][Full Text] [Related]  

  • 8. An improved algorithm for stoichiometric network analysis: theory and applications.
    Urbanczik R; Wagner C
    Bioinformatics; 2005 Apr; 21(7):1203-10. PubMed ID: 15539452
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Cellular and molecular physiology of Escherichia coli in the adaptation to aerobic environments.
    Iuchi S; Weiner L
    J Biochem; 1996 Dec; 120(6):1055-63. PubMed ID: 9010748
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Co-regulation of metabolic genes is better explained by flux coupling than by network distance.
    Notebaart RA; Teusink B; Siezen RJ; Papp B
    PLoS Comput Biol; 2008 Jan; 4(1):e26. PubMed ID: 18225949
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Stability of metabolic correlations under changing environmental conditions in Escherichia coli--a systems approach.
    Szymanski J; Jozefczuk S; Nikoloski Z; Selbig J; Nikiforova V; Catchpole G; Willmitzer L
    PLoS One; 2009 Oct; 4(10):e7441. PubMed ID: 19829699
    [TBL] [Abstract][Full Text] [Related]  

  • 12. A Causal Regulation Modeling Algorithm for Temporal Events with Application to
    Chen Y; Mao R; Xu J; Huang Y; Xu J; Cui S; Zhu Z; Ji X; Huang S; Huang Y; Huang HY; Yen SC; Lin YC; Huang HD
    Int J Mol Sci; 2024 May; 25(11):. PubMed ID: 38891842
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Hypothesis-driven approach to predict transcriptional units from gene expression data.
    Steinhauser D; Junker BH; Luedemann A; Selbig J; Kopka J
    Bioinformatics; 2004 Aug; 20(12):1928-39. PubMed ID: 15044239
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Genome-scale identification of conditionally essential genes in E. coli by DNA microarrays.
    Tong X; Campbell JW; Balázsi G; Kay KA; Wanner BL; Gerdes SY; Oltvai ZN
    Biochem Biophys Res Commun; 2004 Sep; 322(1):347-54. PubMed ID: 15313213
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Mining pathway signatures from microarray data and relevant biological knowledge.
    Panteris E; Swift S; Payne A; Liu X
    J Biomed Inform; 2007 Dec; 40(6):698-706. PubMed ID: 17395545
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Mining time-dependent gene features.
    Capobianco E
    J Bioinform Comput Biol; 2005 Oct; 3(5):1191-205. PubMed ID: 16278954
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Low degree metabolites explain essential reactions and enhance modularity in biological networks.
    Samal A; Singh S; Giri V; Krishna S; Raghuram N; Jain S
    BMC Bioinformatics; 2006 Mar; 7():118. PubMed ID: 16524470
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Finite-time parametric identification for the model representing the metabolic and genetic regulatory effects of sequential aerobic respiration and anaerobic fermentation processes in Escherichia coli.
    Sepúlveda-Gálvez A; Agustín Badillo-Corona J; Chairez I
    Math Med Biol; 2018 Sep; 35(3):299-317. PubMed ID: 28340243
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Genetically constrained metabolic flux analysis.
    Cox SJ; Shalel Levanon S; Bennett GN; San KY
    Metab Eng; 2005; 7(5-6):445-56. PubMed ID: 16143552
    [TBL] [Abstract][Full Text] [Related]  

  • 20. The Modular Organization of Protein Interactions in Escherichia coli.
    Peregrín-Alvarez JM; Xiong X; Su C; Parkinson J
    PLoS Comput Biol; 2009 Oct; 5(10):e1000523. PubMed ID: 19798435
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.