These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

184 related articles for article (PubMed ID: 16530285)

  • 1. Beyond Mfold: recent advances in RNA bioinformatics.
    Reeder J; Höchsmann M; Rehmsmeier M; Voss B; Giegerich R
    J Biotechnol; 2006 Jun; 124(1):41-55. PubMed ID: 16530285
    [TBL] [Abstract][Full Text] [Related]  

  • 2. RNA-related tools on the Bielefeld Bioinformatics Server.
    Sczyrba A; Krüger J; Mersch H; Kurtz S; Giegerich R
    Nucleic Acids Res; 2003 Jul; 31(13):3767-70. PubMed ID: 12824414
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Prediction and visualization of structural switches in RNA.
    Giegerich R; Haase D; Rehmsmeier M
    Pac Symp Biocomput; 1999; ():126-37. PubMed ID: 10380191
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Mfold web server for nucleic acid folding and hybridization prediction.
    Zuker M
    Nucleic Acids Res; 2003 Jul; 31(13):3406-15. PubMed ID: 12824337
    [TBL] [Abstract][Full Text] [Related]  

  • 5. pknotsRG: RNA pseudoknot folding including near-optimal structures and sliding windows.
    Reeder J; Steffen P; Giegerich R
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W320-4. PubMed ID: 17478505
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Consensus shapes: an alternative to the Sankoff algorithm for RNA consensus structure prediction.
    Reeder J; Giegerich R
    Bioinformatics; 2005 Sep; 21(17):3516-23. PubMed ID: 16020472
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Thermodynamic heuristics with case-based reasoning: combined insights for RNA pseudoknot secondary structure.
    Al-Khatib RM; Rashid NA; Abdullah R
    J Biomol Struct Dyn; 2011 Aug; 29(1):1-26. PubMed ID: 21696223
    [TBL] [Abstract][Full Text] [Related]  

  • 8. RNAbor: a web server for RNA structural neighbors.
    Freyhult E; Moulton V; Clote P
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W305-9. PubMed ID: 17526527
    [TBL] [Abstract][Full Text] [Related]  

  • 9. INFO-RNA--a server for fast inverse RNA folding satisfying sequence constraints.
    Busch A; Backofen R
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W310-3. PubMed ID: 17452349
    [TBL] [Abstract][Full Text] [Related]  

  • 10. RADAR: a web server for RNA data analysis and research.
    Khaladkar M; Bellofatto V; Wang JT; Tian B; Shapiro BA
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W300-4. PubMed ID: 17517784
    [TBL] [Abstract][Full Text] [Related]  

  • 11. A method to improve prediction of secondary structure for large single RNA sequences.
    El-Lakkani A; Ibrahim EM
    Biochem Biophys Res Commun; 2018 Feb; 496(2):523-528. PubMed ID: 29339162
    [TBL] [Abstract][Full Text] [Related]  

  • 12. The RNAz web server: prediction of thermodynamically stable and evolutionarily conserved RNA structures.
    Gruber AR; Neuböck R; Hofacker IL; Washietl S
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W335-8. PubMed ID: 17452347
    [TBL] [Abstract][Full Text] [Related]  

  • 13. RNA folding on the 3D triangular lattice.
    Gillespie J; Mayne M; Jiang M
    BMC Bioinformatics; 2009 Nov; 10():369. PubMed ID: 19891777
    [TBL] [Abstract][Full Text] [Related]  

  • 14. CyloFold: secondary structure prediction including pseudoknots.
    Bindewald E; Kluth T; Shapiro BA
    Nucleic Acids Res; 2010 Jul; 38(Web Server issue):W368-72. PubMed ID: 20501603
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Prediction of Secondary Structures Conserved in Multiple RNA Sequences.
    Xu ZZ; Mathews DH
    Methods Mol Biol; 2016; 1490():35-50. PubMed ID: 27665591
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Prediction of RNA secondary structure by free energy minimization.
    Mathews DH; Turner DH
    Curr Opin Struct Biol; 2006 Jun; 16(3):270-8. PubMed ID: 16713706
    [TBL] [Abstract][Full Text] [Related]  

  • 17. RNA 3D Structure Modeling by Combination of Template-Based Method ModeRNA, Template-Free Folding with SimRNA, and Refinement with QRNAS.
    Piatkowski P; Kasprzak JM; Kumar D; Magnus M; Chojnowski G; Bujnicki JM
    Methods Mol Biol; 2016; 1490():217-35. PubMed ID: 27665602
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Bridging the gap in RNA structure prediction.
    Shapiro BA; Yingling YG; Kasprzak W; Bindewald E
    Curr Opin Struct Biol; 2007 Apr; 17(2):157-65. PubMed ID: 17383172
    [TBL] [Abstract][Full Text] [Related]  

  • 19. A method for aligning RNA secondary structures and its application to RNA motif detection.
    Liu J; Wang JT; Hu J; Tian B
    BMC Bioinformatics; 2005 Apr; 6():89. PubMed ID: 15817128
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Cache-oblivious dynamic programming for bioinformatics.
    Chowdhury RA; Le HS; Ramachandran V
    IEEE/ACM Trans Comput Biol Bioinform; 2010; 7(3):495-510. PubMed ID: 20671320
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.