374 related articles for article (PubMed ID: 16539422)
1. Gas-phase DNA oligonucleotide structures. A QM/MM and atoms in molecules study.
Robertazzi A; Platts JA
J Phys Chem A; 2006 Mar; 110(11):3992-4000. PubMed ID: 16539422
[TBL] [Abstract][Full Text] [Related]
2. A QM/MM study of cisplatin-DNA oligonucleotides: from simple models to realistic systems.
Robertazzi A; Platts JA
Chemistry; 2006 Jul; 12(22):5747-56. PubMed ID: 16710864
[TBL] [Abstract][Full Text] [Related]
3. Insights into DNA binding of ruthenium arene complexes: role of hydrogen bonding and pi stacking.
Gkionis K; Platts JA; Hill JG
Inorg Chem; 2008 May; 47(9):3893-902. PubMed ID: 18393492
[TBL] [Abstract][Full Text] [Related]
4. Modeling H-bonding and solvent effects in the alkylation of pyrimidine bases by a prototype quinone methide: a DFT study.
Freccero M; Di Valentin C; Sarzi-Amadè M;
J Am Chem Soc; 2003 Mar; 125(12):3544-53. PubMed ID: 12643716
[TBL] [Abstract][Full Text] [Related]
5. Extended weak bonding interactions in DNA: pi-stacking (base-base), base-backbone, and backbone-backbone interactions.
Matta CF; Castillo N; Boyd RJ
J Phys Chem B; 2006 Jan; 110(1):563-78. PubMed ID: 16471569
[TBL] [Abstract][Full Text] [Related]
6. Electronic properties, hydrogen bonding, stacking, and cation binding of DNA and RNA bases.
Sponer J; Leszczynski J; Hobza P
Biopolymers; 2001-2002; 61(1):3-31. PubMed ID: 11891626
[TBL] [Abstract][Full Text] [Related]
7. Homopairing possibilities of the DNA bases cytosine and guanine: an ab initio DFT study.
Kelly RE; Lee YJ; Kantorovich LN
J Phys Chem B; 2005 Nov; 109(46):22045-52. PubMed ID: 16853862
[TBL] [Abstract][Full Text] [Related]
8. Hydrogen bonding of the nucleobase mimic 2-pyridone to fluorobenzenes: an ab initio investigation.
Frey JA; Leist R; Leutwyler S
J Phys Chem A; 2006 Mar; 110(12):4188-95. PubMed ID: 16553369
[TBL] [Abstract][Full Text] [Related]
9. Trans Hoogsteen/sugar edge base pairing in RNA. Structures, energies, and stabilities from quantum chemical calculations.
Mládek A; Sharma P; Mitra A; Bhattacharyya D; Sponer J; Sponer JE
J Phys Chem B; 2009 Feb; 113(6):1743-55. PubMed ID: 19152254
[TBL] [Abstract][Full Text] [Related]
10. How strong can the bend be on a DNA helix from cisplatin? DFT and MP2 quantum chemical calculations of cisplatin-bridged DNA purine bases.
Burda JV; Leszczynski J
Inorg Chem; 2003 Nov; 42(22):7162-72. PubMed ID: 14577785
[TBL] [Abstract][Full Text] [Related]
11. Mutual relationship between stacking and hydrogen bonding in DNA. Theoretical study of guanine-cytosine, guanine-5-methylcytosine, and their dimers.
Acosta-Silva C; Branchadell V; Bertran J; Oliva A
J Phys Chem B; 2010 Aug; 114(31):10217-27. PubMed ID: 20684646
[TBL] [Abstract][Full Text] [Related]
12. Synthesis of [(MeCyt)2H]I-structure and stability of a dimeric threefold hydrogen-bonded 1-methylcytosinium 1-methylcytosine cation.
Krüger T; Bruhn C; Steinborn D
Org Biomol Chem; 2004 Sep; 2(17):2513-6. PubMed ID: 15326532
[TBL] [Abstract][Full Text] [Related]
13. Hydrogen bonding and covalent effects in binding of cisplatin to purine bases: ab initio and atoms in molecules studies.
Robertazzi A; Platts JA
Inorg Chem; 2005 Jan; 44(2):267-74. PubMed ID: 15651872
[TBL] [Abstract][Full Text] [Related]
14. Magnitude and nature of carbohydrate-aromatic interactions: ab initio calculations of fucose-benzene complex.
Tsuzuki S; Uchimaru T; Mikami M
J Phys Chem B; 2009 Apr; 113(16):5617-21. PubMed ID: 19331351
[TBL] [Abstract][Full Text] [Related]
15. Refinement of DNA structures through near-edge X-ray absorption fine structure analysis: applications on guanine and cytosine nucleobases, nucleosides, and nucleotides.
Hua W; Gao B; Li S; Agren H; Luo Y
J Phys Chem B; 2010 Oct; 114(41):13214-22. PubMed ID: 20873844
[TBL] [Abstract][Full Text] [Related]
16. Effects of microsolvation on the adenine-uracil base pair and its radical anion: adenine-uracil mono- and dihydrates.
Kim S; Schaefer HF
J Phys Chem A; 2007 Oct; 111(41):10381-9. PubMed ID: 17705454
[TBL] [Abstract][Full Text] [Related]
17. Role of hydrogen bonds in protein-DNA recognition: effect of nonplanar amino groups.
Mukherjee S; Majumdar S; Bhattacharyya D
J Phys Chem B; 2005 May; 109(20):10484-92. PubMed ID: 16852270
[TBL] [Abstract][Full Text] [Related]
18. Estimation of strength in different extra Watson-Crick hydrogen bonds in DNA double helices through quantum chemical studies.
Bandyopadhyay D; Bhattacharyya D
Biopolymers; 2006 Oct; 83(3):313-25. PubMed ID: 16729290
[TBL] [Abstract][Full Text] [Related]
19. Interpretation of hydrogen bonding in the weak and strong regions using conceptual DFT descriptors.
Ozen AS; De Proft F; Aviyente V; Geerlings P
J Phys Chem A; 2006 May; 110(17):5860-8. PubMed ID: 16640382
[TBL] [Abstract][Full Text] [Related]
20. An analysis of the different behavior of DNA and RNA through the study of the mutual relationship between stacking and hydrogen bonding.
Gil A; Branchadell V; Bertran J; Oliva A
J Phys Chem B; 2009 Apr; 113(14):4907-14. PubMed ID: 19284733
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
