193 related articles for article (PubMed ID: 16539734)
1. Comparison of the latest commercial short and long oligonucleotide microarray technologies.
de Reyniès A; Geromin D; Cayuela JM; Petel F; Dessen P; Sigaux F; Rickman DS
BMC Genomics; 2006 Mar; 7():51. PubMed ID: 16539734
[TBL] [Abstract][Full Text] [Related]
2. Large scale real-time PCR validation on gene expression measurements from two commercial long-oligonucleotide microarrays.
Wang Y; Barbacioru C; Hyland F; Xiao W; Hunkapiller KL; Blake J; Chan F; Gonzalez C; Zhang L; Samaha RR
BMC Genomics; 2006 Mar; 7():59. PubMed ID: 16551369
[TBL] [Abstract][Full Text] [Related]
3. Cross platform microarray analysis for robust identification of differentially expressed genes.
Bosotti R; Locatelli G; Healy S; Scacheri E; Sartori L; Mercurio C; Calogero R; Isacchi A
BMC Bioinformatics; 2007 Mar; 8 Suppl 1(Suppl 1):S5. PubMed ID: 17430572
[TBL] [Abstract][Full Text] [Related]
4. Strategies for comparing gene expression profiles from different microarray platforms: application to a case-control experiment.
Severgnini M; Bicciato S; Mangano E; Scarlatti F; Mezzelani A; Mattioli M; Ghidoni R; Peano C; Bonnal R; Viti F; Milanesi L; De Bellis G; Battaglia C
Anal Biochem; 2006 Jun; 353(1):43-56. PubMed ID: 16624241
[TBL] [Abstract][Full Text] [Related]
5. A sequence-oriented comparison of gene expression measurements across different hybridization-based technologies.
Kuo WP; Liu F; Trimarchi J; Punzo C; Lombardi M; Sarang J; Whipple ME; Maysuria M; Serikawa K; Lee SY; McCrann D; Kang J; Shearstone JR; Burke J; Park DJ; Wang X; Rector TL; Ricciardi-Castagnoli P; Perrin S; Choi S; Bumgarner R; Kim JH; Short GF; Freeman MW; Seed B; Jensen R; Church GM; Hovig E; Cepko CL; Park P; Ohno-Machado L; Jenssen TK
Nat Biotechnol; 2006 Jul; 24(7):832-40. PubMed ID: 16823376
[TBL] [Abstract][Full Text] [Related]
6. Evaluation of the similarity of gene expression data estimated with SAGE and Affymetrix GeneChips.
van Ruissen F; Ruijter JM; Schaaf GJ; Asgharnegad L; Zwijnenburg DA; Kool M; Baas F
BMC Genomics; 2005 Jun; 6():91. PubMed ID: 15955238
[TBL] [Abstract][Full Text] [Related]
7. Long versus short oligonucleotide microarrays for the study of gene expression in nonhuman primates.
Walker SJ; Wang Y; Grant KA; Chan F; Hellmann GM
J Neurosci Methods; 2006 Apr; 152(1-2):179-89. PubMed ID: 16253343
[TBL] [Abstract][Full Text] [Related]
8. Redefinition of Affymetrix probe sets by sequence overlap with cDNA microarray probes reduces cross-platform inconsistencies in cancer-associated gene expression measurements.
Carter SL; Eklund AC; Mecham BH; Kohane IS; Szallasi Z
BMC Bioinformatics; 2005 Apr; 6():107. PubMed ID: 15850491
[TBL] [Abstract][Full Text] [Related]
9. Statistical analysis of an RNA titration series evaluates microarray precision and sensitivity on a whole-array basis.
Holloway AJ; Oshlack A; Diyagama DS; Bowtell DD; Smyth GK
BMC Bioinformatics; 2006 Nov; 7():511. PubMed ID: 17118209
[TBL] [Abstract][Full Text] [Related]
10. Performance evaluation of commercial short-oligonucleotide microarrays and the impact of noise in making cross-platform correlations.
Shippy R; Sendera TJ; Lockner R; Palaniappan C; Kaysser-Kranich T; Watts G; Alsobrook J
BMC Genomics; 2004 Sep; 5():61. PubMed ID: 15345031
[TBL] [Abstract][Full Text] [Related]
11. Cross-platform comparison of SYBR Green real-time PCR with TaqMan PCR, microarrays and other gene expression measurement technologies evaluated in the MicroArray Quality Control (MAQC) study.
Arikawa E; Sun Y; Wang J; Zhou Q; Ning B; Dial SL; Guo L; Yang J
BMC Genomics; 2008 Jul; 9():328. PubMed ID: 18620571
[TBL] [Abstract][Full Text] [Related]
12. Evaluation of DNA microarray results with quantitative gene expression platforms.
Canales RD; Luo Y; Willey JC; Austermiller B; Barbacioru CC; Boysen C; Hunkapiller K; Jensen RV; Knight CR; Lee KY; Ma Y; Maqsodi B; Papallo A; Peters EH; Poulter K; Ruppel PL; Samaha RR; Shi L; Yang W; Zhang L; Goodsaid FM
Nat Biotechnol; 2006 Sep; 24(9):1115-22. PubMed ID: 16964225
[TBL] [Abstract][Full Text] [Related]
13. Independence and reproducibility across microarray platforms.
Larkin JE; Frank BC; Gavras H; Sultana R; Quackenbush J
Nat Methods; 2005 May; 2(5):337-44. PubMed ID: 15846360
[TBL] [Abstract][Full Text] [Related]
14. Dissecting tBHQ induced ARE-driven gene expression through long and short oligonucleotide arrays.
Li J; Spletter ML; Johnson JA
Physiol Genomics; 2005 Mar; 21(1):43-58. PubMed ID: 15613614
[TBL] [Abstract][Full Text] [Related]
15. An alternative method to amplify RNA without loss of signal conservation for expression analysis with a proteinase DNA microarray in the ArrayTube format.
Schüler S; Wenz I; Wiederanders B; Slickers P; Ehricht R
BMC Genomics; 2006 Jun; 7():144. PubMed ID: 16768788
[TBL] [Abstract][Full Text] [Related]
16. Performance comparison of multiple microarray platforms for gene expression profiling.
Liu F; Kuo WP; Jenssen TK; Hovig E
Methods Mol Biol; 2012; 802():141-55. PubMed ID: 22130879
[TBL] [Abstract][Full Text] [Related]
17. Comparison of gene expression measurements from cDNA and 60-mer oligonucleotide microarrays.
Zhu B; Ping G; Shinohara Y; Zhang Y; Baba Y
Genomics; 2005 Jun; 85(6):657-65. PubMed ID: 15885493
[TBL] [Abstract][Full Text] [Related]
18. Current issues for DNA microarrays: platform comparison, double linear amplification, and universal RNA reference.
Park PJ; Cao YA; Lee SY; Kim JW; Chang MS; Hart R; Choi S
J Biotechnol; 2004 Sep; 112(3):225-45. PubMed ID: 15313001
[TBL] [Abstract][Full Text] [Related]
19. Three microarray platforms: an analysis of their concordance in profiling gene expression.
Petersen D; Chandramouli GV; Geoghegan J; Hilburn J; Paarlberg J; Kim CH; Munroe D; Gangi L; Han J; Puri R; Staudt L; Weinstein J; Barrett JC; Green J; Kawasaki ES
BMC Genomics; 2005 May; 6():63. PubMed ID: 15876355
[TBL] [Abstract][Full Text] [Related]
20. Design and evaluation of Actichip, a thematic microarray for the study of the actin cytoskeleton.
Muller J; Mehlen A; Vetter G; Yatskou M; Muller A; Chalmel F; Poch O; Friederich E; Vallar L
BMC Genomics; 2007 Aug; 8():294. PubMed ID: 17727702
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
