BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

386 related articles for article (PubMed ID: 16547073)

  • 21. Protein fold recognition by mapping predicted secondary structures.
    Russell RB; Copley RR; Barton GJ
    J Mol Biol; 1996 Jun; 259(3):349-65. PubMed ID: 8676374
    [TBL] [Abstract][Full Text] [Related]  

  • 22. A Shannon entropy-based filter detects high- quality profile-profile alignments in searches for remote homologues.
    Capriotti E; Fariselli P; Rossi I; Casadio R
    Proteins; 2004 Feb; 54(2):351-60. PubMed ID: 14696197
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Estimating quality of template-based protein models by alignment stability.
    Chen H; Kihara D
    Proteins; 2008 May; 71(3):1255-74. PubMed ID: 18041762
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Probabilistic multi-class multi-kernel learning: on protein fold recognition and remote homology detection.
    Damoulas T; Girolami MA
    Bioinformatics; 2008 May; 24(10):1264-70. PubMed ID: 18378524
    [TBL] [Abstract][Full Text] [Related]  

  • 25. DescFold: a web server for protein fold recognition.
    Yan RX; Si JN; Wang C; Zhang Z
    BMC Bioinformatics; 2009 Dec; 10():416. PubMed ID: 20003426
    [TBL] [Abstract][Full Text] [Related]  

  • 26. DNABind: a hybrid algorithm for structure-based prediction of DNA-binding residues by combining machine learning- and template-based approaches.
    Liu R; Hu J
    Proteins; 2013 Nov; 81(11):1885-99. PubMed ID: 23737141
    [TBL] [Abstract][Full Text] [Related]  

  • 27. NdPASA: a novel pairwise protein sequence alignment algorithm that incorporates neighbor-dependent amino acid propensities.
    Wang J; Feng JA
    Proteins; 2005 Feb; 58(3):628-37. PubMed ID: 15616964
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Three-stage prediction of protein beta-sheets by neural networks, alignments and graph algorithms.
    Cheng J; Baldi P
    Bioinformatics; 2005 Jun; 21 Suppl 1():i75-84. PubMed ID: 15961501
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Structure-based evaluation of sequence comparison and fold recognition alignment accuracy.
    Domingues FS; Lackner P; Andreeva A; Sippl MJ
    J Mol Biol; 2000 Apr; 297(4):1003-13. PubMed ID: 10736233
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Statistical potential-based amino acid similarity matrices for aligning distantly related protein sequences.
    Tan YH; Huang H; Kihara D
    Proteins; 2006 Aug; 64(3):587-600. PubMed ID: 16799934
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Enhanced protein fold recognition using a structural alphabet.
    Deschavanne P; Tufféry P
    Proteins; 2009 Jul; 76(1):129-37. PubMed ID: 19089985
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Global sequence properties for superfamily prediction: a machine learning approach.
    Dobson RJ; Munroe PB; Caulfield MJ; Saqi MA
    J Integr Bioinform; 2009 Aug; 6(1):109. PubMed ID: 20134076
    [TBL] [Abstract][Full Text] [Related]  

  • 33. An introduction to protein contact prediction.
    Hamilton N; Huber T
    Methods Mol Biol; 2008; 453():87-104. PubMed ID: 18712298
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Improving fold recognition without folds.
    Przybylski D; Rost B
    J Mol Biol; 2004 Jul; 341(1):255-69. PubMed ID: 15312777
    [TBL] [Abstract][Full Text] [Related]  

  • 35. fRMSDPred: predicting local RMSD between structural fragments using sequence information.
    Rangwala H; Karypis G
    Proteins; 2008 Aug; 72(3):1005-18. PubMed ID: 18300251
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Beyond the Twilight Zone: automated prediction of structural properties of proteins by recursive neural networks and remote homology information.
    Mooney C; Pollastri G
    Proteins; 2009 Oct; 77(1):181-90. PubMed ID: 19422056
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Fast model-based protein homology detection without alignment.
    Hochreiter S; Heusel M; Obermayer K
    Bioinformatics; 2007 Jul; 23(14):1728-36. PubMed ID: 17488755
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Studies on the rules of β-strand alignment in a protein β-sheet structure.
    Zhang L; Zhang N; Ruan JS; Zhang T
    J Theor Biol; 2011 Sep; 285(1):69-76. PubMed ID: 21745480
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Combination of threading potentials and sequence profiles improves fold recognition.
    Panchenko AR; Marchler-Bauer A; Bryant SH
    J Mol Biol; 2000 Mar; 296(5):1319-31. PubMed ID: 10698636
    [TBL] [Abstract][Full Text] [Related]  

  • 40. FROST: a filter-based fold recognition method.
    Marin A; Pothier J; Zimmermann K; Gibrat JF
    Proteins; 2002 Dec; 49(4):493-509. PubMed ID: 12402359
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 20.