386 related articles for article (PubMed ID: 16547073)
21. Protein fold recognition by mapping predicted secondary structures.
Russell RB; Copley RR; Barton GJ
J Mol Biol; 1996 Jun; 259(3):349-65. PubMed ID: 8676374
[TBL] [Abstract][Full Text] [Related]
22. A Shannon entropy-based filter detects high- quality profile-profile alignments in searches for remote homologues.
Capriotti E; Fariselli P; Rossi I; Casadio R
Proteins; 2004 Feb; 54(2):351-60. PubMed ID: 14696197
[TBL] [Abstract][Full Text] [Related]
23. Estimating quality of template-based protein models by alignment stability.
Chen H; Kihara D
Proteins; 2008 May; 71(3):1255-74. PubMed ID: 18041762
[TBL] [Abstract][Full Text] [Related]
24. Probabilistic multi-class multi-kernel learning: on protein fold recognition and remote homology detection.
Damoulas T; Girolami MA
Bioinformatics; 2008 May; 24(10):1264-70. PubMed ID: 18378524
[TBL] [Abstract][Full Text] [Related]
25. DescFold: a web server for protein fold recognition.
Yan RX; Si JN; Wang C; Zhang Z
BMC Bioinformatics; 2009 Dec; 10():416. PubMed ID: 20003426
[TBL] [Abstract][Full Text] [Related]
26. DNABind: a hybrid algorithm for structure-based prediction of DNA-binding residues by combining machine learning- and template-based approaches.
Liu R; Hu J
Proteins; 2013 Nov; 81(11):1885-99. PubMed ID: 23737141
[TBL] [Abstract][Full Text] [Related]
27. NdPASA: a novel pairwise protein sequence alignment algorithm that incorporates neighbor-dependent amino acid propensities.
Wang J; Feng JA
Proteins; 2005 Feb; 58(3):628-37. PubMed ID: 15616964
[TBL] [Abstract][Full Text] [Related]
28. Three-stage prediction of protein beta-sheets by neural networks, alignments and graph algorithms.
Cheng J; Baldi P
Bioinformatics; 2005 Jun; 21 Suppl 1():i75-84. PubMed ID: 15961501
[TBL] [Abstract][Full Text] [Related]
29. Structure-based evaluation of sequence comparison and fold recognition alignment accuracy.
Domingues FS; Lackner P; Andreeva A; Sippl MJ
J Mol Biol; 2000 Apr; 297(4):1003-13. PubMed ID: 10736233
[TBL] [Abstract][Full Text] [Related]
30. Statistical potential-based amino acid similarity matrices for aligning distantly related protein sequences.
Tan YH; Huang H; Kihara D
Proteins; 2006 Aug; 64(3):587-600. PubMed ID: 16799934
[TBL] [Abstract][Full Text] [Related]
31. Enhanced protein fold recognition using a structural alphabet.
Deschavanne P; Tufféry P
Proteins; 2009 Jul; 76(1):129-37. PubMed ID: 19089985
[TBL] [Abstract][Full Text] [Related]
32. Global sequence properties for superfamily prediction: a machine learning approach.
Dobson RJ; Munroe PB; Caulfield MJ; Saqi MA
J Integr Bioinform; 2009 Aug; 6(1):109. PubMed ID: 20134076
[TBL] [Abstract][Full Text] [Related]
33. An introduction to protein contact prediction.
Hamilton N; Huber T
Methods Mol Biol; 2008; 453():87-104. PubMed ID: 18712298
[TBL] [Abstract][Full Text] [Related]
34. Improving fold recognition without folds.
Przybylski D; Rost B
J Mol Biol; 2004 Jul; 341(1):255-69. PubMed ID: 15312777
[TBL] [Abstract][Full Text] [Related]
35. fRMSDPred: predicting local RMSD between structural fragments using sequence information.
Rangwala H; Karypis G
Proteins; 2008 Aug; 72(3):1005-18. PubMed ID: 18300251
[TBL] [Abstract][Full Text] [Related]
36. Beyond the Twilight Zone: automated prediction of structural properties of proteins by recursive neural networks and remote homology information.
Mooney C; Pollastri G
Proteins; 2009 Oct; 77(1):181-90. PubMed ID: 19422056
[TBL] [Abstract][Full Text] [Related]
37. Fast model-based protein homology detection without alignment.
Hochreiter S; Heusel M; Obermayer K
Bioinformatics; 2007 Jul; 23(14):1728-36. PubMed ID: 17488755
[TBL] [Abstract][Full Text] [Related]
38. Studies on the rules of β-strand alignment in a protein β-sheet structure.
Zhang L; Zhang N; Ruan JS; Zhang T
J Theor Biol; 2011 Sep; 285(1):69-76. PubMed ID: 21745480
[TBL] [Abstract][Full Text] [Related]
39. Combination of threading potentials and sequence profiles improves fold recognition.
Panchenko AR; Marchler-Bauer A; Bryant SH
J Mol Biol; 2000 Mar; 296(5):1319-31. PubMed ID: 10698636
[TBL] [Abstract][Full Text] [Related]
40. FROST: a filter-based fold recognition method.
Marin A; Pothier J; Zimmermann K; Gibrat JF
Proteins; 2002 Dec; 49(4):493-509. PubMed ID: 12402359
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]