323 related articles for article (PubMed ID: 16564038)
1. Structure of a complex of Thermoactinomyces vulgaris R-47 alpha-amylase 2 with maltohexaose demonstrates the important role of aromatic residues at the reducing end of the substrate binding cleft.
Ohtaki A; Mizuno M; Yoshida H; Tonozuka T; Sakano Y; Kamitori S
Carbohydr Res; 2006 Jun; 341(8):1041-6. PubMed ID: 16564038
[TBL] [Abstract][Full Text] [Related]
2. Crystal structure of Thermoactinomyces vulgaris R-47 alpha-amylase II (TVAII) hydrolyzing cyclodextrins and pullulan at 2.6 A resolution.
Kamitori S; Kondo S; Okuyama K; Yokota T; Shimura Y; Tonozuka T; Sakano Y
J Mol Biol; 1999 Apr; 287(5):907-21. PubMed ID: 10222200
[TBL] [Abstract][Full Text] [Related]
3. Crystal structures and structural comparison of Thermoactinomyces vulgaris R-47 alpha-amylase 1 (TVAI) at 1.6 A resolution and alpha-amylase 2 (TVAII) at 2.3 A resolution.
Kamitori S; Abe A; Ohtaki A; Kaji A; Tonozuka T; Sakano Y
J Mol Biol; 2002 Apr; 318(2):443-53. PubMed ID: 12051850
[TBL] [Abstract][Full Text] [Related]
4. Crystal structure of a catalytic-site mutant alpha-amylase from Bacillus subtilis complexed with maltopentaose.
Fujimoto Z; Takase K; Doui N; Momma M; Matsumoto T; Mizuno H
J Mol Biol; 1998 Mar; 277(2):393-407. PubMed ID: 9514750
[TBL] [Abstract][Full Text] [Related]
5. Studies on the hydrolyzing mechanism for cyclodextrins of Thermoactinomyces vulgaris R-47 alpha-amylase 2 (TVAII). X-ray structure of the mutant E354A complexed with beta-cyclodextrin, and kinetic analyses on cyclodextrins.
Kondo S; Ohtaki A; Tonozuka T; Sakano Y; Kamitori S
J Biochem; 2001 Mar; 129(3):423-8. PubMed ID: 11226882
[TBL] [Abstract][Full Text] [Related]
6. Mutual conversion of substrate specificities of Thermoactinomyces vulgaris R-47 alpha-amylases TVAI and TVAII by site-directed mutagenesis.
Ohtaki A; Iguchi A; Mizuno M; Tonozuka T; Sakano Y; Kamitori S
Carbohydr Res; 2003 Jul; 338(15):1553-8. PubMed ID: 12860426
[TBL] [Abstract][Full Text] [Related]
7. Complexes of Thermoactinomyces vulgaris R-47 alpha-amylase 1 and pullulan model oligossacharides provide new insight into the mechanism for recognizing substrates with alpha-(1,6) glycosidic linkages.
Abe A; Yoshida H; Tonozuka T; Sakano Y; Kamitori S
FEBS J; 2005 Dec; 272(23):6145-53. PubMed ID: 16302977
[TBL] [Abstract][Full Text] [Related]
8. Role of Phe286 in the recognition mechanism of cyclomaltooligosaccharides (cyclodextrins) by Thermoactinomyces vulgaris R-47 alpha-amylase 2 (TVAII). X-ray structures of the mutant TVAIIs, F286A and F286Y, and kinetic analyses of the Phe286-replaced mutant TVAIIs.
Ohtaki A; Kondo S; Shimura Y; Tonozuka T; Sakano Y; Kamitori S
Carbohydr Res; 2001 Sep; 334(4):309-13. PubMed ID: 11527532
[TBL] [Abstract][Full Text] [Related]
9. The crystal structure of Thermoactinomyces vulgaris R-47 alpha-amylase II (TVA II) complexed with transglycosylated product.
Mizuno M; Tonozuka T; Uechi A; Ohtaki A; Ichikawa K; Kamitori S; Nishikawa A; Sakano Y
Eur J Biochem; 2004 Jun; 271(12):2530-8. PubMed ID: 15182368
[TBL] [Abstract][Full Text] [Related]
10. Complex structures of Thermoactinomyces vulgaris R-47 alpha-amylase 2 with acarbose and cyclodextrins demonstrate the multiple substrate recognition mechanism.
Ohtaki A; Mizuno M; Tonozuka T; Sakano Y; Kamitori S
J Biol Chem; 2004 Jul; 279(30):31033-40. PubMed ID: 15138257
[TBL] [Abstract][Full Text] [Related]
11. Refined molecular structure of pig pancreatic alpha-amylase at 2.1 A resolution.
Larson SB; Greenwood A; Cascio D; Day J; McPherson A
J Mol Biol; 1994 Feb; 235(5):1560-84. PubMed ID: 8107092
[TBL] [Abstract][Full Text] [Related]
12. Molecular structure of a barley alpha-amylase-inhibitor complex: implications for starch binding and catalysis.
Kadziola A; Søgaard M; Svensson B; Haser R
J Mol Biol; 1998 Apr; 278(1):205-17. PubMed ID: 9571044
[TBL] [Abstract][Full Text] [Related]
13. The 'pair of sugar tongs' site on the non-catalytic domain C of barley alpha-amylase participates in substrate binding and activity.
Bozonnet S; Jensen MT; Nielsen MM; Aghajari N; Jensen MH; Kramhøft B; Willemoës M; Tranier S; Haser R; Svensson B
FEBS J; 2007 Oct; 274(19):5055-67. PubMed ID: 17803687
[TBL] [Abstract][Full Text] [Related]
14. Novel inhibitor for prolyl tripeptidyl aminopeptidase from Porphyromonas gingivalis and details of substrate-recognition mechanism.
Xu Y; Nakajima Y; Ito K; Zheng H; Oyama H; Heiser U; Hoffmann T; Gärtner UT; Demuth HU; Yoshimoto T
J Mol Biol; 2008 Jan; 375(3):708-19. PubMed ID: 18042490
[TBL] [Abstract][Full Text] [Related]
15. Complex structures of Thermoactinomyces vulgaris R-47 alpha-amylase 1 with malto-oligosaccharides demonstrate the role of domain N acting as a starch-binding domain.
Abe A; Tonozuka T; Sakano Y; Kamitori S
J Mol Biol; 2004 Jan; 335(3):811-22. PubMed ID: 14687576
[TBL] [Abstract][Full Text] [Related]
16. Analysis of catalytic residues of Thermoactinomyces vulgaris R-47 alpha-amylase II (TVA II) by site-directed mutagenesis.
Ichikawa K; Tonozuka T; Yokota T; Shimura Y; Sakano Y
Biosci Biotechnol Biochem; 2000 Dec; 64(12):2692-5. PubMed ID: 11210138
[TBL] [Abstract][Full Text] [Related]
17. Crystal structure of a maltotetraose-forming exo-amylase from Pseudomonas stutzeri.
Morishita Y; Hasegawa K; Matsuura Y; Katsube Y; Kubota M; Sakai S
J Mol Biol; 1997 Apr; 267(3):661-72. PubMed ID: 9126844
[TBL] [Abstract][Full Text] [Related]
18. Structures of Thermoactinomyces vulgaris R-47 alpha-amylase II complexed with substrate analogues.
Yokota T; Tonozuka T; Shimura Y; Ichikawa K; Kamitori S; Sakano Y
Biosci Biotechnol Biochem; 2001 Mar; 65(3):619-26. PubMed ID: 11330677
[TBL] [Abstract][Full Text] [Related]
19. Crystal structures of a mutant maltotetraose-forming exo-amylase cocrystallized with maltopentaose.
Yoshioka Y; Hasegawa K; Matsuura Y; Katsube Y; Kubota M
J Mol Biol; 1997 Aug; 271(4):619-28. PubMed ID: 9281429
[TBL] [Abstract][Full Text] [Related]
20. Structural basis for the substrate specificity of a Bacillus 1,3-1,4-beta-glucanase.
Gaiser OJ; Piotukh K; Ponnuswamy MN; Planas A; Borriss R; Heinemann U
J Mol Biol; 2006 Apr; 357(4):1211-25. PubMed ID: 16483609
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]