BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

87 related articles for article (PubMed ID: 16595562)

  • 1. Using mRNAs lengths to accurately predict the alternatively spliced gene products in Caenorhabditis elegans.
    Agrawal R; Stormo GD
    Bioinformatics; 2006 May; 22(10):1239-44. PubMed ID: 16595562
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Integrating alternative splicing detection into gene prediction.
    Foissac S; Schiex T
    BMC Bioinformatics; 2005 Feb; 6():25. PubMed ID: 15705189
    [TBL] [Abstract][Full Text] [Related]  

  • 3. RASE: recognition of alternatively spliced exons in C.elegans.
    Rätsch G; Sonnenburg S; Schölkopf B
    Bioinformatics; 2005 Jun; 21 Suppl 1():i369-77. PubMed ID: 15961480
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Non-EST-based prediction of novel alternatively spliced cassette exons with cell signaling function in Caenorhabditis elegans and human.
    Leparc GG; Mitra RD
    Nucleic Acids Res; 2007; 35(10):3192-202. PubMed ID: 17452356
    [TBL] [Abstract][Full Text] [Related]  

  • 5. PALMA: mRNA to genome alignments using large margin algorithms.
    Schulze U; Hepp B; Ong CS; Rätsch G
    Bioinformatics; 2007 Aug; 23(15):1892-900. PubMed ID: 17537755
    [TBL] [Abstract][Full Text] [Related]  

  • 6. The third and fourth tropomyosin isoforms of Caenorhabditis elegans are expressed in the pharynx and intestines and are essential for development and morphology.
    Anyanful A; Sakube Y; Takuwa K; Kagawa H
    J Mol Biol; 2001 Oct; 313(3):525-37. PubMed ID: 11676537
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Improved spliced alignment from an information theoretic approach.
    Zhang M; Gish W
    Bioinformatics; 2006 Jan; 22(1):13-20. PubMed ID: 16267086
    [TBL] [Abstract][Full Text] [Related]  

  • 8. The tpa-1 gene of Caenorhabditis elegans encodes two proteins similar to Ca(2+)-independent protein kinase Cs: evidence by complete genomic and complementary DNA sequences of the tpa-1 gene.
    Sano T; Tabuse Y; Nishiwaki K; Miwa J
    J Mol Biol; 1995 Aug; 251(4):477-85. PubMed ID: 7658466
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Inferring global levels of alternative splicing isoforms using a generative model of microarray data.
    Shai O; Morris QD; Blencowe BJ; Frey BJ
    Bioinformatics; 2006 Mar; 22(5):606-13. PubMed ID: 16403798
    [TBL] [Abstract][Full Text] [Related]  

  • 10. The Caenorhabditis elegans gene T23G5.5 encodes an antidepressant- and cocaine-sensitive dopamine transporter.
    Jayanthi LD; Apparsundaram S; Malone MD; Ward E; Miller DM; Eppler M; Blakely RD
    Mol Pharmacol; 1998 Oct; 54(4):601-9. PubMed ID: 9765501
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Genome structure, mapping and expression of the tropomyosin gene tmy-1 of Caenorhabditis elegans.
    Kagawa H; Sugimoto K; Matsumoto H; Inoue T; Imadzu H; Takuwa K; Sakube Y
    J Mol Biol; 1995 Sep; 251(5):603-13. PubMed ID: 7666414
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Plant Gene and Alternatively Spliced Variant Annotator. A plant genome annotation pipeline for rice gene and alternatively spliced variant identification with cross-species expressed sequence tag conservation from seven plant species.
    Chen FC; Wang SS; Chaw SM; Huang YT; Chuang TJ
    Plant Physiol; 2007 Mar; 143(3):1086-95. PubMed ID: 17220363
    [TBL] [Abstract][Full Text] [Related]  

  • 13. JIGSAW: integration of multiple sources of evidence for gene prediction.
    Allen JE; Salzberg SL
    Bioinformatics; 2005 Sep; 21(18):3596-603. PubMed ID: 16076884
    [TBL] [Abstract][Full Text] [Related]  

  • 14. ACE-it: a tool for genome-wide integration of gene dosage and RNA expression data.
    van Wieringen WN; Belien JA; Vosse SJ; Achame EM; Ylstra B
    Bioinformatics; 2006 Aug; 22(15):1919-20. PubMed ID: 16731696
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Orthologues of the Caenorhabditis elegans longevity gene clk-1 in mouse and human.
    Asaumi S; Kuroyanagi H; Seki N; Shirasawa T
    Genomics; 1999 Jun; 58(3):293-301. PubMed ID: 10373327
    [TBL] [Abstract][Full Text] [Related]  

  • 16. ptl-1, a Caenorhabditis elegans gene whose products are homologous to the tau microtubule-associated proteins.
    McDermott JB; Aamodt S; Aamodt E
    Biochemistry; 1996 Jul; 35(29):9415-23. PubMed ID: 8755720
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Genomic structure and 5' regulatory regions of the let-23 gene in the nematode C. elegans.
    Sakai T; Koga M; Ohshima Y
    J Mol Biol; 1996 Mar; 256(3):548-55. PubMed ID: 8604137
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Assessing the application of Ka/Ks ratio test to alternatively spliced exons.
    Xing Y; Lee C
    Bioinformatics; 2005 Oct; 21(19):3701-3. PubMed ID: 16091412
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Genomic organization and expression analysis for hcstk, a serine/threonine protein kinase gene of Haemonchus contortus, and comparison with Caenorhabditis elegans par-1.
    Nikolaou S; Hartman D; Nisbet AJ; Presidente PJ; Gasser RB
    Gene; 2004 Dec; 343(2):313-22. PubMed ID: 15588586
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Applying genetic programming to the prediction of alternative mRNA splice variants.
    Vukusic I; Grellscheid SN; Wiehe T
    Genomics; 2007 Apr; 89(4):471-9. PubMed ID: 17276654
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 5.