These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

167 related articles for article (PubMed ID: 16597246)

  • 1. De novo analysis of peptide tandem mass spectra by spectral graph partitioning.
    Bern M; Goldberg D
    J Comput Biol; 2006 Mar; 13(2):364-78. PubMed ID: 16597246
    [TBL] [Abstract][Full Text] [Related]  

  • 2. A graph-theoretic approach for the separation of b and y ions in tandem mass spectra.
    Yan B; Pan C; Olman VN; Hettich RL; Xu Y
    Bioinformatics; 2005 Mar; 21(5):563-74. PubMed ID: 15454408
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Peptide Fragment Ion Analyser (PFIA): a simple and versatile tool for the interpretation of tandem mass spectrometric data and de novo sequencing of peptides.
    Jagannath S; Sabareesh V
    Rapid Commun Mass Spectrom; 2007; 21(18):3033-8. PubMed ID: 17705347
    [TBL] [Abstract][Full Text] [Related]  

  • 4. pNovo: de novo peptide sequencing and identification using HCD spectra.
    Chi H; Sun RX; Yang B; Song CQ; Wang LH; Liu C; Fu Y; Yuan ZF; Wang HP; He SM; Dong MQ
    J Proteome Res; 2010 May; 9(5):2713-24. PubMed ID: 20329752
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Novor: real-time peptide de novo sequencing software.
    Ma B
    J Am Soc Mass Spectrom; 2015 Nov; 26(11):1885-94. PubMed ID: 26122521
    [TBL] [Abstract][Full Text] [Related]  

  • 6. A suboptimal algorithm for de novo peptide sequencing via tandem mass spectrometry.
    Lu B; Chen T
    J Comput Biol; 2003; 10(1):1-12. PubMed ID: 12676047
    [TBL] [Abstract][Full Text] [Related]  

  • 7. De novo peptide sequencing via tandem mass spectrometry.
    Dancík V; Addona TA; Clauser KR; Vath JE; Pevzner PA
    J Comput Biol; 1999; 6(3-4):327-42. PubMed ID: 10582570
    [TBL] [Abstract][Full Text] [Related]  

  • 8. pNovo+: de novo peptide sequencing using complementary HCD and ETD tandem mass spectra.
    Chi H; Chen H; He K; Wu L; Yang B; Sun RX; Liu J; Zeng WF; Song CQ; He SM; Dong MQ
    J Proteome Res; 2013 Feb; 12(2):615-25. PubMed ID: 23272783
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Automatic quality assessment of peptide tandem mass spectra.
    Bern M; Goldberg D; McDonald WH; Yates JR
    Bioinformatics; 2004 Aug; 20 Suppl 1():i49-54. PubMed ID: 15262780
    [TBL] [Abstract][Full Text] [Related]  

  • 10. NovoHCD: de novo peptide sequencing from HCD spectra.
    Yan Y; Kusalik AJ; Wu FX
    IEEE Trans Nanobioscience; 2014 Jun; 13(2):65-72. PubMed ID: 24771591
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Rapid identification of comigrating gel-isolated proteins by ion trap-mass spectrometry.
    Arnott D; Henzel WJ; Stults JT
    Electrophoresis; 1998 May; 19(6):968-80. PubMed ID: 9638943
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Separation of ion types in tandem mass spectrometry data interpretation -- a graph-theoretic approach.
    Yan B; Pan C; Olman VN; Hettich RL; Xu Y
    Proc IEEE Comput Syst Bioinform Conf; 2004; ():236-44. PubMed ID: 16448017
    [TBL] [Abstract][Full Text] [Related]  

  • 13. A dynamic programming approach to de novo peptide sequencing via tandem mass spectrometry.
    Chen T; Kao MY; Tepel M; Rush J; Church GM
    J Comput Biol; 2001; 8(3):325-37. PubMed ID: 11535179
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Robust accurate identification of peptides (RAId): deciphering MS2 data using a structured library search with de novo based statistics.
    Alves G; Yu YK
    Bioinformatics; 2005 Oct; 21(19):3726-32. PubMed ID: 16105903
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Searching sequence databases via de novo peptide sequencing by tandem mass spectrometry.
    Johnson RS; Taylor JA
    Mol Biotechnol; 2002 Nov; 22(3):301-15. PubMed ID: 12448884
    [TBL] [Abstract][Full Text] [Related]  

  • 16. De novo sequencing methods in proteomics.
    Hughes C; Ma B; Lajoie GA
    Methods Mol Biol; 2010; 604():105-21. PubMed ID: 20013367
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Improved peptide sequencing using isotope information inherent in tandem mass spectra.
    Cannon WR; Jarman KD
    Rapid Commun Mass Spectrom; 2003; 17(15):1793-801. PubMed ID: 12872285
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Algorithms for the de novo sequencing of peptides from tandem mass spectra.
    Allmer J
    Expert Rev Proteomics; 2011 Oct; 8(5):645-57. PubMed ID: 21999834
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Fast de novo peptide sequencing and spectral alignment via tree decomposition.
    Liu C; Song Y; Yan B; Xu Y; Cai L
    Pac Symp Biocomput; 2006; ():255-66. PubMed ID: 17094244
    [TBL] [Abstract][Full Text] [Related]  

  • 20. pFind 2.0: a software package for peptide and protein identification via tandem mass spectrometry.
    Wang LH; Li DQ; Fu Y; Wang HP; Zhang JF; Yuan ZF; Sun RX; Zeng R; He SM; Gao W
    Rapid Commun Mass Spectrom; 2007; 21(18):2985-91. PubMed ID: 17702057
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.