152 related articles for article (PubMed ID: 16603076)
1. A statistical method for predicting splice variants between two groups of samples using GeneChip expression array data.
Fan W; Khalid N; Hallahan AR; Olson JM; Zhao LP
Theor Biol Med Model; 2006 Apr; 3():19. PubMed ID: 16603076
[TBL] [Abstract][Full Text] [Related]
2. Comparison of Affymetrix Gene Array with the Exon Array shows potential application for detection of transcript isoform variation.
Ha KCh; Coulombe-Huntington J; Majewski J
BMC Genomics; 2009 Nov; 10():519. PubMed ID: 19909511
[TBL] [Abstract][Full Text] [Related]
3. A statistical framework for genome-wide discovery of biomarker splice variations with GeneChip Human Exon 1.0 ST Arrays.
Yoshida R; Numata K; Imoto S; Nagasaki M; Doi A; Ueno K; Miyano S
Genome Inform; 2006; 17(1):88-99. PubMed ID: 17503359
[TBL] [Abstract][Full Text] [Related]
4. Exon array analysis using re-defined probe sets results in reliable identification of alternatively spliced genes in non-small cell lung cancer.
Langer W; Sohler F; Leder G; Beckmann G; Seidel H; Gröne J; Hummel M; Sommer A
BMC Genomics; 2010 Nov; 11():676. PubMed ID: 21118496
[TBL] [Abstract][Full Text] [Related]
5. Alternative splicing and differential gene expression in colon cancer detected by a whole genome exon array.
Gardina PJ; Clark TA; Shimada B; Staples MK; Yang Q; Veitch J; Schweitzer A; Awad T; Sugnet C; Dee S; Davies C; Williams A; Turpaz Y
BMC Genomics; 2006 Dec; 7():325. PubMed ID: 17192196
[TBL] [Abstract][Full Text] [Related]
6. Prediction of alternatively skipped exons and splicing enhancers from exon junction arrays.
Kechris K; Yang YH; Yeh RF
BMC Genomics; 2008 Nov; 9():551. PubMed ID: 19021909
[TBL] [Abstract][Full Text] [Related]
7. Genome-wide analysis of alternative splicing in medulloblastoma identifies splicing patterns characteristic of normal cerebellar development.
Menghi F; Jacques TS; Barenco M; Schwalbe EC; Clifford SC; Hubank M; Ham J
Cancer Res; 2011 Mar; 71(6):2045-55. PubMed ID: 21248070
[TBL] [Abstract][Full Text] [Related]
8. Predicting splice variant from DNA chip expression data.
Hu GK; Madore SJ; Moldover B; Jatkoe T; Balaban D; Thomas J; Wang Y
Genome Res; 2001 Jul; 11(7):1237-45. PubMed ID: 11435406
[TBL] [Abstract][Full Text] [Related]
9. A Brassica exon array for whole-transcript gene expression profiling.
Love CG; Graham NS; O Lochlainn S; Bowen HC; May ST; White PJ; Broadley MR; Hammond JP; King GJ
PLoS One; 2010 Sep; 5(9):. PubMed ID: 20862292
[TBL] [Abstract][Full Text] [Related]
10. Framework for reanalysis of publicly available Affymetrix® GeneChip® data sets based on functional regions of interest.
Saka E; Harrison BJ; West K; Petruska JC; Rouchka EC
BMC Genomics; 2017 Dec; 18(Suppl 10):875. PubMed ID: 29244006
[TBL] [Abstract][Full Text] [Related]
11. A cross-platform comparison of genome-wide expression changes of laser microdissected lung tissue of C-Raf transgenic mice using 3'IVT and exon array.
Londhe KB; Borlak J
PLoS One; 2012; 7(7):e40778. PubMed ID: 22815814
[TBL] [Abstract][Full Text] [Related]
12. GATExplorer: genomic and transcriptomic explorer; mapping expression probes to gene loci, transcripts, exons and ncRNAs.
Risueño A; Fontanillo C; Dinger ME; De Las Rivas J
BMC Bioinformatics; 2010 Apr; 11():221. PubMed ID: 20429936
[TBL] [Abstract][Full Text] [Related]
13. Simultaneous genome-wide gene expression and transcript isoform profiling in the human malaria parasite.
Turnbull LB; Siwo GH; Button-Simons KA; Tan A; Checkley LA; Painter HJ; Llinás M; Ferdig MT
PLoS One; 2017; 12(11):e0187595. PubMed ID: 29112986
[TBL] [Abstract][Full Text] [Related]
14. Differentially expressed alternatively spliced genes in malignant pleural mesothelioma identified using massively parallel transcriptome sequencing.
Dong L; Jensen RV; De Rienzo A; Gordon GJ; Xu Y; Sugarbaker DJ; Bueno R
BMC Med Genet; 2009 Dec; 10():149. PubMed ID: 20043850
[TBL] [Abstract][Full Text] [Related]
15. SplicerEX: a tool for the automated detection and classification of mRNA changes from conventional and splice-sensitive microarray expression data.
Robinson TJ; Forte E; Salinas RE; Puri S; Marengo M; Garcia-Blanco MA; Luftig MA
RNA; 2012 Aug; 18(8):1435-45. PubMed ID: 22736799
[TBL] [Abstract][Full Text] [Related]
16. BEAT: Bioinformatics Exon Array Tool to store, analyze and visualize Affymetrix GeneChip Human Exon Array data from disease experiments.
Consiglio A; Carella M; De Caro G; Delle Foglie G; Giovannelli C; Grillo G; Ianigro M; Licciulli F; Palumbo O; Piepoli A; Ranieri E; Liuni S
BMC Bioinformatics; 2012 Mar; 13 Suppl 4(Suppl 4):S21. PubMed ID: 22536968
[TBL] [Abstract][Full Text] [Related]
17. easyExon--a Java-based GUI tool for processing and visualization of Affymetrix exon array data.
Chang TY; Li YY; Jen CH; Yang TP; Lin CH; Hsu MT; Wang HW
BMC Bioinformatics; 2008 Oct; 9():432. PubMed ID: 18851762
[TBL] [Abstract][Full Text] [Related]
18. Long versus short oligonucleotide microarrays for the study of gene expression in nonhuman primates.
Walker SJ; Wang Y; Grant KA; Chan F; Hellmann GM
J Neurosci Methods; 2006 Apr; 152(1-2):179-89. PubMed ID: 16253343
[TBL] [Abstract][Full Text] [Related]
19. Gene expression and isoform variation analysis using Affymetrix Exon Arrays.
Bemmo A; Benovoy D; Kwan T; Gaffney DJ; Jensen RV; Majewski J
BMC Genomics; 2008 Nov; 9():529. PubMed ID: 18990248
[TBL] [Abstract][Full Text] [Related]
20. Integrating multiple genome annotation databases improves the interpretation of microarray gene expression data.
Yin J; McLoughlin S; Jeffery IB; Glaviano A; Kennedy B; Higgins DG
BMC Genomics; 2010 Jan; 11():50. PubMed ID: 20089164
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
