117 related articles for article (PubMed ID: 16618102)
1. Anomalous orientation-dependent effective pair interaction among histidine and other amino acid residues in metalloproteins: breakdown of the hydropathy scale index.
Mukherjee A; Bagchi B
Biochemistry; 2006 Apr; 45(16):5129-39. PubMed ID: 16618102
[TBL] [Abstract][Full Text] [Related]
2. Orientation-dependent potential of mean force for protein folding.
Mukherjee A; Bhimalapuram P; Bagchi B
J Chem Phys; 2005 Jul; 123(1):014901. PubMed ID: 16035863
[TBL] [Abstract][Full Text] [Related]
3. Metals in proteins: correlation between the metal-ion type, coordination number and the amino-acid residues involved in the coordination.
Dokmanić I; Sikić M; Tomić S
Acta Crystallogr D Biol Crystallogr; 2008 Mar; 64(Pt 3):257-63. PubMed ID: 18323620
[TBL] [Abstract][Full Text] [Related]
4. Geometry of nonbonded interactions involving planar groups in proteins.
Chakrabarti P; Bhattacharyya R
Prog Biophys Mol Biol; 2007; 95(1-3):83-137. PubMed ID: 17629549
[TBL] [Abstract][Full Text] [Related]
5. Identifying stabilizing key residues in proteins using interresidue interaction energy matrix.
Bendová-Biedermannová L; Hobza P; Vondrásek J
Proteins; 2008 Jul; 72(1):402-13. PubMed ID: 18214960
[TBL] [Abstract][Full Text] [Related]
6. Design and engineering of metalloproteins containing unnatural amino acids or non-native metal-containing cofactors.
Lu Y
Curr Opin Chem Biol; 2005 Apr; 9(2):118-26. PubMed ID: 15811795
[TBL] [Abstract][Full Text] [Related]
7. Structural basis for the unusual specificity of Escherichia coli aminopeptidase N.
Addlagatta A; Gay L; Matthews BW
Biochemistry; 2008 May; 47(19):5303-11. PubMed ID: 18416562
[TBL] [Abstract][Full Text] [Related]
8. Local interactions in protein folding determined through an inverse folding model.
Bastolla U; Porto M; Ortíz AR
Proteins; 2008 Apr; 71(1):278-99. PubMed ID: 17932940
[TBL] [Abstract][Full Text] [Related]
9. Amino acid adsorption on mesoporous materials: influence of types of amino acids, modification of mesoporous materials, and solution conditions.
Gao Q; Xu W; Xu Y; Wu D; Sun Y; Deng F; Shen W
J Phys Chem B; 2008 Feb; 112(7):2261-7. PubMed ID: 18217746
[TBL] [Abstract][Full Text] [Related]
10. Investigation of surface properties of amino acids: polarity scale for amino acids as a means to predict surface exposed residues in films of proteins.
Maheshwari R; Dhathathreyan A
J Colloid Interface Sci; 2004 Sep; 277(1):79-83. PubMed ID: 15276041
[TBL] [Abstract][Full Text] [Related]
11. Solvent-exposed residues located in the beta-sheet modulate the stability of the tetramerization domain of p53--a structural and combinatorial approach.
Mora P; Carbajo RJ; Pineda-Lucena A; Sánchez del Pino MM; Pérez-Payá E
Proteins; 2008 Jun; 71(4):1670-85. PubMed ID: 18076077
[TBL] [Abstract][Full Text] [Related]
12. Predicting functionally important residues from sequence conservation.
Capra JA; Singh M
Bioinformatics; 2007 Aug; 23(15):1875-82. PubMed ID: 17519246
[TBL] [Abstract][Full Text] [Related]
13. Modeling of metal interaction geometries for protein-ligand docking.
Seebeck B; Reulecke I; Kämper A; Rarey M
Proteins; 2008 May; 71(3):1237-54. PubMed ID: 18041759
[TBL] [Abstract][Full Text] [Related]
14. Direct correlation between proteins' folding rates and their amino acid compositions: an ab initio folding rate prediction.
Ma BG; Guo JX; Zhang HY
Proteins; 2006 Nov; 65(2):362-72. PubMed ID: 16937389
[TBL] [Abstract][Full Text] [Related]
15. Amino acid selective cross-saturation method for identification of proximal residue pairs in a protein-protein complex.
Igarashi S; Osawa M; Takeuchi K; Ozawa S; Shimada I
J Am Chem Soc; 2008 Sep; 130(36):12168-76. PubMed ID: 18707104
[TBL] [Abstract][Full Text] [Related]
16. Pairwise energies for polypeptide coarse-grained models derived from atomic force fields.
Betancourt MR; Omovie SJ
J Chem Phys; 2009 May; 130(19):195103. PubMed ID: 19466867
[TBL] [Abstract][Full Text] [Related]
17. A 3(10)-helical pentapeptide in water: interplay of alpha,alpha-disubstituted amino acids and the central residue on structure formation.
Wang J; McElheny D; Fu Y; Li G; Kim J; Zhou Z; Wu L; Keiderling TA; Hammer RP
Biopolymers; 2009; 92(5):452-64. PubMed ID: 19489061
[TBL] [Abstract][Full Text] [Related]
18. Anchoring mechanisms of membrane-associated M13 major coat protein.
Stopar D; Spruijt RB; Hemminga MA
Chem Phys Lipids; 2006 Jun; 141(1-2):83-93. PubMed ID: 16620800
[TBL] [Abstract][Full Text] [Related]
19. Effect of pH and salts on the binding of free amino acids to the corn protein zein studied by thin-layer chromatography.
Cserháti T; Forgács E
Amino Acids; 2005 Feb; 28(1):99-103. PubMed ID: 15611848
[TBL] [Abstract][Full Text] [Related]
20. Solvent exposure imparts similar selective pressures across a range of yeast proteins.
Conant GC; Stadler PF
Mol Biol Evol; 2009 May; 26(5):1155-61. PubMed ID: 19233963
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]