These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

194 related articles for article (PubMed ID: 16618964)

  • 1. Archaeology and evolution of transfer RNA genes in the Escherichia coli genome.
    Withers M; Wernisch L; dos Reis M
    RNA; 2006 Jun; 12(6):933-42. PubMed ID: 16618964
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Genomic divergence of Escherichia coli strains: evidence for horizontal transfer and variation in mutation rates.
    Elena SF; Whittam TS; Winkworth CL; Riley MA; Lenski RE
    Int Microbiol; 2005 Dec; 8(4):271-8. PubMed ID: 16562379
    [TBL] [Abstract][Full Text] [Related]  

  • 3. The evolutionary dynamics of tRNA-gene copy number and codon-use in E. coli.
    McDonald MJ; Chou CH; Swamy KB; Huang HD; Leu JY
    BMC Evol Biol; 2015 Aug; 15():163. PubMed ID: 26282127
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Codon usage revisited: Lack of correlation between codon usage and the number of tRNA genes in enterobacteria.
    Rojas J; Castillo G; Leiva LE; Elgamal S; Orellana O; Ibba M; Katz A
    Biochem Biophys Res Commun; 2018 Aug; 502(4):450-455. PubMed ID: 29859934
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Effect of correlated tRNA abundances on translation errors and evolution of codon usage bias.
    Shah P; Gilchrist MA
    PLoS Genet; 2010 Sep; 6(9):e1001128. PubMed ID: 20862306
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Molecular archaeology of the Escherichia coli genome.
    Lawrence JG; Ochman H
    Proc Natl Acad Sci U S A; 1998 Aug; 95(16):9413-7. PubMed ID: 9689094
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Evolution of tRNA Repertoires in Bacillus Inferred with OrthoAlign.
    Tremblay-Savard O; Benzaid B; Lang BF; El-Mabrouk N
    Mol Biol Evol; 2015 Jun; 32(6):1643-56. PubMed ID: 25660374
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Genome-based identification of chromosomal regions specific for Salmonella spp.
    Hansen-Wester I; Hensel M
    Infect Immun; 2002 May; 70(5):2351-60. PubMed ID: 11953370
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Coevolution of codon usage and tRNA genes leads to alternative stable states of biased codon usage.
    Higgs PG; Ran W
    Mol Biol Evol; 2008 Nov; 25(11):2279-91. PubMed ID: 18687657
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Orthologs, turn-over, and remolding of tRNAs in primates and fruit flies.
    Velandia-Huerto CA; Berkemer SJ; Hoffmann A; Retzlaff N; Romero Marroquín LC; Hernández-Rosales M; Stadler PF; Bermúdez-Santana CI
    BMC Genomics; 2016 Aug; 17(1):617. PubMed ID: 27515907
    [TBL] [Abstract][Full Text] [Related]  

  • 11. A novel strategy for the identification of genomic islands by comparative analysis of the contents and contexts of tRNA sites in closely related bacteria.
    Ou HY; Chen LL; Lonnen J; Chaudhuri RR; Thani AB; Smith R; Garton NJ; Hinton J; Pallen M; Barer MR; Rajakumar K
    Nucleic Acids Res; 2006 Jan; 34(1):e3. PubMed ID: 16414954
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Novel Structural Variation and Evolutionary Characteristics of Chloroplast tRNA in
    Zhang TT; Yang Y; Song XY; Gao XY; Zhang XL; Zhao JJ; Zhou KH; Zhao CB; Li W; Yang DG; Ma XF; Li ZH
    Genes (Basel); 2021 May; 12(6):. PubMed ID: 34071968
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Complete mitochondrial DNA sequence of oyster Crassostrea hongkongensis-a case of "Tandem duplication-random loss" for genome rearrangement in Crassostrea?
    Yu Z; Wei Z; Kong X; Shi W
    BMC Genomics; 2008 Oct; 9():477. PubMed ID: 18847502
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Co-variation of tRNA abundance and codon usage in Escherichia coli at different growth rates.
    Dong H; Nilsson L; Kurland CG
    J Mol Biol; 1996 Aug; 260(5):649-63. PubMed ID: 8709146
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Codon usage of highly expressed genes affects proteome-wide translation efficiency.
    Frumkin I; Lajoie MJ; Gregg CJ; Hornung G; Church GM; Pilpel Y
    Proc Natl Acad Sci U S A; 2018 May; 115(21):E4940-E4949. PubMed ID: 29735666
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Hidden cases of tRNA gene duplication and remolding in mitochondrial genomes of amphipods.
    Romanova EV; Bukin YS; Mikhailov KV; Logacheva MD; Aleoshin VV; Sherbakov DY
    Mol Phylogenet Evol; 2020 Mar; 144():106710. PubMed ID: 31846708
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Evolution of pan-genomes of Escherichia coli, Shigella spp., and Salmonella enterica.
    Gordienko EN; Kazanov MD; Gelfand MS
    J Bacteriol; 2013 Jun; 195(12):2786-92. PubMed ID: 23585535
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Gene duplications in the E. coli genome: common themes among pathotypes.
    Bernabeu M; Sánchez-Herrero JF; Huedo P; Prieto A; Hüttener M; Rozas J; Juárez A
    BMC Genomics; 2019 Apr; 20(1):313. PubMed ID: 31014240
    [TBL] [Abstract][Full Text] [Related]  

  • 19. An improved estimation of tRNA expression to better elucidate the coevolution between tRNA abundance and codon usage in bacteria.
    Wei Y; Silke JR; Xia X
    Sci Rep; 2019 Feb; 9(1):3184. PubMed ID: 30816249
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Codon usage bias from tRNA's point of view: redundancy, specialization, and efficient decoding for translation optimization.
    Rocha EP
    Genome Res; 2004 Nov; 14(11):2279-86. PubMed ID: 15479947
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.