These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

165 related articles for article (PubMed ID: 16672244)

  • 1. Functional annotation prediction: all for one and one for all.
    Sasson O; Kaplan N; Linial M
    Protein Sci; 2006 Jun; 15(6):1557-62. PubMed ID: 16672244
    [TBL] [Abstract][Full Text] [Related]  

  • 2. ProtoNet 4.0: a hierarchical classification of one million protein sequences.
    Kaplan N; Sasson O; Inbar U; Friedlich M; Fromer M; Fleischer H; Portugaly E; Linial N; Linial M
    Nucleic Acids Res; 2005 Jan; 33(Database issue):D216-8. PubMed ID: 15608180
    [TBL] [Abstract][Full Text] [Related]  

  • 3. A functional hierarchical organization of the protein sequence space.
    Kaplan N; Friedlich M; Fromer M; Linial M
    BMC Bioinformatics; 2004 Dec; 5():196. PubMed ID: 15596019
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Improving automatic GO annotation with semantic similarity.
    Sarker B; Khare N; Devignes MD; Aridhi S
    BMC Bioinformatics; 2022 Dec; 23(Suppl 2):433. PubMed ID: 36510133
    [TBL] [Abstract][Full Text] [Related]  

  • 5. ProtoNet 6.0: organizing 10 million protein sequences in a compact hierarchical family tree.
    Rappoport N; Karsenty S; Stern A; Linial N; Linial M
    Nucleic Acids Res; 2012 Jan; 40(Database issue):D313-20. PubMed ID: 22121228
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Automatic detection of false annotations via binary property clustering.
    Kaplan N; Linial M
    BMC Bioinformatics; 2005 Mar; 6():46. PubMed ID: 15755318
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Incorporating functional inter-relationships into protein function prediction algorithms.
    Pandey G; Myers CL; Kumar V
    BMC Bioinformatics; 2009 May; 10():142. PubMed ID: 19435516
    [TBL] [Abstract][Full Text] [Related]  

  • 8. ProtoNet: hierarchical classification of the protein space.
    Sasson O; Vaaknin A; Fleischer H; Portugaly E; Bilu Y; Linial N; Linial M
    Nucleic Acids Res; 2003 Jan; 31(1):348-52. PubMed ID: 12520020
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Entropy-driven partitioning of the hierarchical protein space.
    Rappoport N; Stern A; Linial N; Linial M
    Bioinformatics; 2014 Sep; 30(17):i624-30. PubMed ID: 25161256
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Enhanced automated function prediction using distantly related sequences and contextual association by PFP.
    Hawkins T; Luban S; Kihara D
    Protein Sci; 2006 Jun; 15(6):1550-6. PubMed ID: 16672240
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Information theory applied to the sparse gene ontology annotation network to predict novel gene function.
    Tao Y; Sam L; Li J; Friedman C; Lussier YA
    Bioinformatics; 2007 Jul; 23(13):i529-38. PubMed ID: 17646340
    [TBL] [Abstract][Full Text] [Related]  

  • 12. HFSP: high speed homology-driven function annotation of proteins.
    Mahlich Y; Steinegger M; Rost B; Bromberg Y
    Bioinformatics; 2018 Jul; 34(13):i304-i312. PubMed ID: 29950013
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Prediction of protein subcellular localization.
    Yu CS; Chen YC; Lu CH; Hwang JK
    Proteins; 2006 Aug; 64(3):643-51. PubMed ID: 16752418
    [TBL] [Abstract][Full Text] [Related]  

  • 14. PANDORA: keyword-based analysis of protein sets by integration of annotation sources.
    Kaplan N; Vaaknin A; Linial M
    Nucleic Acids Res; 2003 Oct; 31(19):5617-26. PubMed ID: 14500825
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Protein function prediction by massive integration of evolutionary analyses and multiple data sources.
    Cozzetto D; Buchan DW; Bryson K; Jones DT
    BMC Bioinformatics; 2013; 14 Suppl 3(Suppl 3):S1. PubMed ID: 23514099
    [TBL] [Abstract][Full Text] [Related]  

  • 16. In silico characterization of proteins: UniProt, InterPro and Integr8.
    Mulder NJ; Kersey P; Pruess M; Apweiler R
    Mol Biotechnol; 2008 Feb; 38(2):165-77. PubMed ID: 18219596
    [TBL] [Abstract][Full Text] [Related]  

  • 17. CMASA: an accurate algorithm for detecting local protein structural similarity and its application to enzyme catalytic site annotation.
    Li GH; Huang JF
    BMC Bioinformatics; 2010 Aug; 11():439. PubMed ID: 20796320
    [TBL] [Abstract][Full Text] [Related]  

  • 18. The development of PIPA: an integrated and automated pipeline for genome-wide protein function annotation.
    Yu C; Zavaljevski N; Desai V; Johnson S; Stevens FJ; Reifman J
    BMC Bioinformatics; 2008 Jan; 9():52. PubMed ID: 18221520
    [TBL] [Abstract][Full Text] [Related]  

  • 19. DAVID Knowledgebase: a gene-centered database integrating heterogeneous gene annotation resources to facilitate high-throughput gene functional analysis.
    Sherman BT; Huang da W; Tan Q; Guo Y; Bour S; Liu D; Stephens R; Baseler MW; Lane HC; Lempicki RA
    BMC Bioinformatics; 2007 Nov; 8():426. PubMed ID: 17980028
    [TBL] [Abstract][Full Text] [Related]  

  • 20.
    ; ; . PubMed ID:
    [No Abstract]   [Full Text] [Related]  

    [Next]    [New Search]
    of 9.