These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

194 related articles for article (PubMed ID: 16674261)

  • 1. Folding thermodynamics of pseudoknotted chain conformations.
    Kopeikin Z; Chen SJ
    J Chem Phys; 2006 Apr; 124(15):154903. PubMed ID: 16674261
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Equilibrium unfolding (folding) pathway of a model H-type pseudoknotted RNA: the role of magnesium ions in stability.
    Nixon PL; Giedroc DP
    Biochemistry; 1998 Nov; 37(46):16116-29. PubMed ID: 9819204
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Predicting RNA pseudoknot folding thermodynamics.
    Cao S; Chen SJ
    Nucleic Acids Res; 2006; 34(9):2634-52. PubMed ID: 16709732
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Predicting RNA folding thermodynamics with a reduced chain representation model.
    Cao S; Chen SJ
    RNA; 2005 Dec; 11(12):1884-97. PubMed ID: 16251382
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Thermodynamics of unfolding mechanisms of mouse mammary tumor virus pseudoknot from a coarse-grained loop-entropy model.
    Tang K; Roca J; Chen R; Ansari A; Liang J
    J Biol Phys; 2022 Jun; 48(2):129-150. PubMed ID: 35445347
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Predicting loop-helix tertiary structural contacts in RNA pseudoknots.
    Cao S; Giedroc DP; Chen SJ
    RNA; 2010 Mar; 16(3):538-52. PubMed ID: 20100813
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Exploring the complex folding kinetics of RNA hairpins: II. Effect of sequence, length, and misfolded states.
    Zhang W; Chen SJ
    Biophys J; 2006 Feb; 90(3):778-87. PubMed ID: 16272439
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Free energy landscapes of RNA/RNA complexes: with applications to snRNA complexes in spliceosomes.
    Cao S; Chen SJ
    J Mol Biol; 2006 Mar; 357(1):292-312. PubMed ID: 16413034
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Monte Carlo simulation for single RNA unfolding by force.
    Liu F; Ou-Yang ZC
    Biophys J; 2005 Jan; 88(1):76-84. PubMed ID: 15501942
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Force-induced misfolding in RNA.
    Manosas M; Junier I; Ritort F
    Phys Rev E Stat Nonlin Soft Matter Phys; 2008 Dec; 78(6 Pt 1):061925. PubMed ID: 19256886
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Mechanical unfolding of RNA hairpins.
    Hyeon C; Thirumalai D
    Proc Natl Acad Sci U S A; 2005 May; 102(19):6789-94. PubMed ID: 15749822
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Thermodynamics of stabilization of RNA pseudoknots by cobalt(III) hexaammine.
    Nixon PL; Theimer CA; Giedroc DP
    Biopolymers; 1999 Oct; 50(4):443-58. PubMed ID: 10423552
    [TBL] [Abstract][Full Text] [Related]  

  • 13. RNA folding energy landscapes.
    Chen SJ; Dill KA
    Proc Natl Acad Sci U S A; 2000 Jan; 97(2):646-51. PubMed ID: 10639133
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Discretized torsional dynamics and the folding of an RNA chain.
    Fernández A; Salthú R; Cendra H
    Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics; 1999 Aug; 60(2 Pt B):2105-19. PubMed ID: 11970003
    [TBL] [Abstract][Full Text] [Related]  

  • 15. A new computational approach for mechanical folding kinetics of RNA hairpins.
    Cao S; Chen SJ
    Biophys J; 2009 May; 96(10):4024-34. PubMed ID: 19450474
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Pseudoknots in RNA folding landscapes.
    Kucharík M; Hofacker IL; Stadler PF; Qin J
    Bioinformatics; 2016 Jan; 32(2):187-94. PubMed ID: 26428288
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Prediction of geometrically feasible three-dimensional structures of pseudoknotted RNA through free energy estimation.
    Zhang J; Dundas J; Lin M; Chen R; Wang W; Liang J
    RNA; 2009 Dec; 15(12):2248-63. PubMed ID: 19864433
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Thermodynamics of folding a pseudoknotted mRNA fragment.
    Gluick TC; Draper DE
    J Mol Biol; 1994 Aug; 241(2):246-62. PubMed ID: 7520082
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Verification of the Crooks fluctuation theorem and recovery of RNA folding free energies.
    Collin D; Ritort F; Jarzynski C; Smith SB; Tinoco I; Bustamante C
    Nature; 2005 Sep; 437(7056):231-4. PubMed ID: 16148928
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Exploring the complex folding kinetics of RNA hairpins: I. General folding kinetics analysis.
    Zhang W; Chen SJ
    Biophys J; 2006 Feb; 90(3):765-77. PubMed ID: 16272440
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.