These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
323 related articles for article (PubMed ID: 16717284)
1. Target prediction for small, noncoding RNAs in bacteria. Tjaden B; Goodwin SS; Opdyke JA; Guillier M; Fu DX; Gottesman S; Storz G Nucleic Acids Res; 2006; 34(9):2791-802. PubMed ID: 16717284 [TBL] [Abstract][Full Text] [Related]
2. TargetRNA: a tool for predicting targets of small RNA action in bacteria. Tjaden B Nucleic Acids Res; 2008 Jul; 36(Web Server issue):W109-13. PubMed ID: 18477632 [TBL] [Abstract][Full Text] [Related]
3. The 5' end of two redundant sRNAs is involved in the regulation of multiple targets, including their own regulator. Guillier M; Gottesman S Nucleic Acids Res; 2008 Dec; 36(21):6781-94. PubMed ID: 18953042 [TBL] [Abstract][Full Text] [Related]
4. IntaRNA: efficient prediction of bacterial sRNA targets incorporating target site accessibility and seed regions. Busch A; Richter AS; Backofen R Bioinformatics; 2008 Dec; 24(24):2849-56. PubMed ID: 18940824 [TBL] [Abstract][Full Text] [Related]
5. Controlling mRNA stability and translation with small, noncoding RNAs. Storz G; Opdyke JA; Zhang A Curr Opin Microbiol; 2004 Apr; 7(2):140-4. PubMed ID: 15063850 [TBL] [Abstract][Full Text] [Related]
6. Translational control and target recognition by Escherichia coli small RNAs in vivo. Urban JH; Vogel J Nucleic Acids Res; 2007; 35(3):1018-37. PubMed ID: 17264113 [TBL] [Abstract][Full Text] [Related]
7. Identifying Hfq-binding small RNA targets in Escherichia coli. Zhang Y; Sun S; Wu T; Wang J; Liu C; Chen L; Zhu X; Zhao Y; Zhang Z; Shi B; Lu H; Chen R Biochem Biophys Res Commun; 2006 May; 343(3):950-5. PubMed ID: 16574072 [TBL] [Abstract][Full Text] [Related]
8. Multiple target regulation by small noncoding RNAs rewires gene expression at the post-transcriptional level. Papenfort K; Vogel J Res Microbiol; 2009 May; 160(4):278-87. PubMed ID: 19366629 [TBL] [Abstract][Full Text] [Related]
9. Target identification of small noncoding RNAs in bacteria. Vogel J; Wagner EG Curr Opin Microbiol; 2007 Jun; 10(3):262-70. PubMed ID: 17574901 [TBL] [Abstract][Full Text] [Related]
11. Mechanistic study of base-pairing small regulatory RNAs in bacteria. Jagodnik J; Brosse A; Le Lam TN; Chiaruttini C; Guillier M Methods; 2017 Mar; 117():67-76. PubMed ID: 27693881 [TBL] [Abstract][Full Text] [Related]
12. Computational identification of sRNA targets. Tjaden B Methods Mol Biol; 2012; 905():227-34. PubMed ID: 22736007 [TBL] [Abstract][Full Text] [Related]
13. Comparative genomics boosts target prediction for bacterial small RNAs. Wright PR; Richter AS; Papenfort K; Mann M; Vogel J; Hess WR; Backofen R; Georg J Proc Natl Acad Sci U S A; 2013 Sep; 110(37):E3487-96. PubMed ID: 23980183 [TBL] [Abstract][Full Text] [Related]
14. Computational prediction of sRNAs and their targets in bacteria. Backofen R; Hess WR RNA Biol; 2010; 7(1):33-42. PubMed ID: 20061798 [TBL] [Abstract][Full Text] [Related]
15. How to find small non-coding RNAs in bacteria. Vogel J; Sharma CM Biol Chem; 2005 Dec; 386(12):1219-38. PubMed ID: 16336117 [TBL] [Abstract][Full Text] [Related]
16. Accessibility and conservation: general features of bacterial small RNA-mRNA interactions? Richter AS; Backofen R RNA Biol; 2012 Jul; 9(7):954-65. PubMed ID: 22767260 [TBL] [Abstract][Full Text] [Related]
17. TargetRNA2: identifying targets of small regulatory RNAs in bacteria. Kery MB; Feldman M; Livny J; Tjaden B Nucleic Acids Res; 2014 Jul; 42(Web Server issue):W124-9. PubMed ID: 24753424 [TBL] [Abstract][Full Text] [Related]
18. Prediction of small, noncoding RNAs in bacteria using heterogeneous data. Tjaden B J Math Biol; 2008 Jan; 56(1-2):183-200. PubMed ID: 17354017 [TBL] [Abstract][Full Text] [Related]
19. Engineering artificial small RNAs for conditional gene silencing in Escherichia coli. Sharma V; Yamamura A; Yokobayashi Y ACS Synth Biol; 2012 Jan; 1(1):6-13. PubMed ID: 23651005 [TBL] [Abstract][Full Text] [Related]
20. An assessment of bacterial small RNA target prediction programs. Pain A; Ott A; Amine H; Rochat T; Bouloc P; Gautheret D RNA Biol; 2015; 12(5):509-13. PubMed ID: 25760244 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]