BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

182 related articles for article (PubMed ID: 16731550)

  • 1. Configurational entropy change of netropsin and distamycin upon DNA minor-groove binding.
    Dolenc J; Baron R; Oostenbrink C; Koller J; van Gunsteren WF
    Biophys J; 2006 Aug; 91(4):1460-70. PubMed ID: 16731550
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Molecular dynamics simulations and free energy calculations of netropsin and distamycin binding to an AAAAA DNA binding site.
    Dolenc J; Oostenbrink C; Koller J; van Gunsteren WF
    Nucleic Acids Res; 2005; 33(2):725-33. PubMed ID: 15687382
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Molecular modelling of the interaction of carbocyclic analogues of netropsin and distamycin with d(CGCGAATTCGCG)2.
    Bielawski K; Bielawska A; Bartulewicz D; Rózański A
    Acta Biochim Pol; 2000; 47(3):855-66. PubMed ID: 11310985
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Interaction of minor groove ligands to an AAATT/AATTT site: correlation of thermodynamic characterization and solution structure.
    Rentzeperis D; Marky LA; Dwyer TJ; Geierstanger BH; Pelton JG; Wemmer DE
    Biochemistry; 1995 Mar; 34(9):2937-45. PubMed ID: 7893707
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Interaction of distamycin A and netropsin with quadruplex and duplex structures: a comparative 1H-NMR study.
    Randazzo A; Galeone A; Esposito V; Varra M; Mayol L
    Nucleosides Nucleotides Nucleic Acids; 2002; 21(8-9):535-45. PubMed ID: 12484449
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Binding of distamycin A and netropsin to the 12mer DNA duplexes containing mixed AT.GC sequences with at most five or three successive AT base pairs.
    Lah J; Vesnaver G
    Biochemistry; 2000 Aug; 39(31):9317-26. PubMed ID: 10924125
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Design of stapled DNA-minor-groove-binding molecules with a mutable atom simulated annealing method.
    Walker WL; Kopka ML; Dickerson RE; Goodsell DS
    J Comput Aided Mol Des; 1997 Nov; 11(6):539-46. PubMed ID: 9491346
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Binding of netropsin to several DNA constructs: evidence for at least two different 1:1 complexes formed from an -AATT-containing ds-DNA construct and a single minor groove binding ligand.
    Freyer MW; Buscaglia R; Cashman D; Hyslop S; Wilson WD; Chaires JB; Lewis EA
    Biophys Chem; 2007 Mar; 126(1-3):186-96. PubMed ID: 16837123
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Selective binding of synthetic polypeptides to DNA of varying composition and sequence: effect of minor groove binding drugs.
    Sponar J; Votavová H
    J Biomol Struct Dyn; 1996 Jun; 13(6):979-87. PubMed ID: 8832380
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Synthetic analogues of netropsin and distamycin. I. Pyridine-containing analogues of distamycin--a molecular modelling study.
    Bielawski K; Bartulewicz D; Rózański A
    Rocz Akad Med Bialymst; 1995; 40(2):352-63. PubMed ID: 8834619
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Free energy calculations offer insights into the influence of receptor flexibility on ligand-receptor binding affinities.
    Dolenc J; Riniker S; Gaspari R; Daura X; van Gunsteren WF
    J Comput Aided Mol Des; 2011 Aug; 25(8):709-16. PubMed ID: 21735261
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Energetic diversity of DNA minor-groove recognition by small molecules displayed through some model ligand-DNA systems.
    Lah J; Vesnaver G
    J Mol Biol; 2004 Sep; 342(1):73-89. PubMed ID: 15313608
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Enthalpy-entropy compensations in drug-DNA binding studies.
    Breslauer KJ; Remeta DP; Chou WY; Ferrante R; Curry J; Zaunczkowski D; Snyder JG; Marky LA
    Proc Natl Acad Sci U S A; 1987 Dec; 84(24):8922-6. PubMed ID: 2827160
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Accurate Estimation of the Standard Binding Free Energy of Netropsin with DNA.
    Zhang H; Gattuso H; Dumont E; Cai W; Monari A; Chipot C; Dehez F
    Molecules; 2018 Jan; 23(2):. PubMed ID: 29370096
    [TBL] [Abstract][Full Text] [Related]  

  • 15. DNA sequence preferences of several AT-selective minor groove binding ligands.
    Abu-Daya A; Brown PM; Fox KR
    Nucleic Acids Res; 1995 Sep; 23(17):3385-92. PubMed ID: 7567447
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Use of capillary electrophoresis in the study of ligand-DNA interactions.
    Hamdan II; Skellern GG; Waigh RD
    Nucleic Acids Res; 1998 Jun; 26(12):3053-8. PubMed ID: 9611254
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Interaction of lambda cro repressor with synthetic operator OR3 studied by competition binding with minor groove binders.
    Gursky GV; Surovaya AN; Kurochkin AV; Chernov BK; Volkov SK; Kirpichnikov MP
    J Biomol Struct Dyn; 1992 Aug; 10(1):15-33. PubMed ID: 1329842
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Minor groove to major groove, an unusual DNA sequence-dependent change in bend directionality by a distamycin dimer.
    Wang S; Munde M; Wang S; Wilson WD
    Biochemistry; 2011 Sep; 50(35):7674-83. PubMed ID: 21800847
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Interaction of synthetic analogues of distamycin and netropsin with nucleic acids. Does curvature of ligand play a role in distamycin-DNA interactions?
    Rao KE; Dasgupta D; Sasisekharan V
    Biochemistry; 1988 Apr; 27(8):3018-24. PubMed ID: 2840956
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Sequence-specific interactions of minor groove binders with restriction fragments of cDNAs for H tau 40 protein and MAP kinase 2. A qualitative and quantitative footprinting study.
    Kittler L; Baguley BC; Löber G; Waring MJ
    J Mol Recognit; 1999; 12(2):121-30. PubMed ID: 10398403
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.