336 related articles for article (PubMed ID: 16792816)
1. Prediction of transmembrane helix orientation in polytopic membrane proteins.
Adamian L; Liang J
BMC Struct Biol; 2006 Jun; 6():13. PubMed ID: 16792816
[TBL] [Abstract][Full Text] [Related]
2. How strongly do sequence conservation patterns and empirical scales correlate with exposure patterns of transmembrane helices of membrane proteins?
Park Y; Helms V
Biopolymers; 2006 Nov; 83(4):389-99. PubMed ID: 16838301
[TBL] [Abstract][Full Text] [Related]
3. Prediction of buried helices in multispan alpha helical membrane proteins.
Adamian L; Liang J
Proteins; 2006 Apr; 63(1):1-5. PubMed ID: 16419070
[TBL] [Abstract][Full Text] [Related]
4. Prediction of helix-helix contacts and interacting helices in polytopic membrane proteins using neural networks.
Fuchs A; Kirschner A; Frishman D
Proteins; 2009 Mar; 74(4):857-71. PubMed ID: 18704938
[TBL] [Abstract][Full Text] [Related]
5. Assembly of transmembrane helices of simple polytopic membrane proteins from sequence conservation patterns.
Park Y; Helms V
Proteins; 2006 Sep; 64(4):895-905. PubMed ID: 16807902
[TBL] [Abstract][Full Text] [Related]
6. Transmembrane helix and topology prediction using hierarchical SVM classifiers and an alternating geometric scoring function.
Lo A; Chiu HS; Sung TY; Hsu WL
Comput Syst Bioinformatics Conf; 2006; ():31-42. PubMed ID: 17369623
[TBL] [Abstract][Full Text] [Related]
7. Transmembrane signaling and assembly of the cytochrome b6f-lipidic charge transfer complex.
Saif Hasan S; Yamashita E; Cramer WA
Biochim Biophys Acta; 2013; 1827(11-12):1295-308. PubMed ID: 23507619
[TBL] [Abstract][Full Text] [Related]
8. Helix packing moments reveal diversity and conservation in membrane protein structure.
Liu W; Eilers M; Patel AB; Smith SO
J Mol Biol; 2004 Mar; 337(3):713-29. PubMed ID: 15019789
[TBL] [Abstract][Full Text] [Related]
9. Comparison of helix interactions in membrane and soluble alpha-bundle proteins.
Eilers M; Patel AB; Liu W; Smith SO
Biophys J; 2002 May; 82(5):2720-36. PubMed ID: 11964258
[TBL] [Abstract][Full Text] [Related]
10. Lipid exposure prediction enhances the inference of rotational angles of transmembrane helices.
Lai JS; Cheng CW; Lo A; Sung TY; Hsu WL
BMC Bioinformatics; 2013 Oct; 14():304. PubMed ID: 24112406
[TBL] [Abstract][Full Text] [Related]
11. Helix packing in polytopic membrane proteins: role of glycine in transmembrane helix association.
Javadpour MM; Eilers M; Groesbeek M; Smith SO
Biophys J; 1999 Sep; 77(3):1609-18. PubMed ID: 10465772
[TBL] [Abstract][Full Text] [Related]
12. Interaction of transmembrane helices by a knobs-into-holes packing characteristic of soluble coiled coils.
Langosch D; Heringa J
Proteins; 1998 May; 31(2):150-9. PubMed ID: 9593189
[TBL] [Abstract][Full Text] [Related]
13. kPROT: a knowledge-based scale for the propensity of residue orientation in transmembrane segments. Application to membrane protein structure prediction.
Pilpel Y; Ben-Tal N; Lancet D
J Mol Biol; 1999 Dec; 294(4):921-35. PubMed ID: 10588897
[TBL] [Abstract][Full Text] [Related]
14. Sequence and conformational preferences at termini of α-helices in membrane proteins: role of the helix environment.
Shelar A; Bansal M
Proteins; 2014 Dec; 82(12):3420-36. PubMed ID: 25257385
[TBL] [Abstract][Full Text] [Related]
15. A knowledge-based scale for the analysis and prediction of buried and exposed faces of transmembrane domain proteins.
Beuming T; Weinstein H
Bioinformatics; 2004 Aug; 20(12):1822-35. PubMed ID: 14988128
[TBL] [Abstract][Full Text] [Related]
16. PetG and PetN, but not PetL, are essential subunits of the cytochrome b6f complex from Synechocystis PCC 6803.
Schneider D; Volkmer T; Rögner M
Res Microbiol; 2007; 158(1):45-50. PubMed ID: 17224258
[TBL] [Abstract][Full Text] [Related]
17. Socket: a program for identifying and analysing coiled-coil motifs within protein structures.
Walshaw J; Woolfson DN
J Mol Biol; 2001 Apr; 307(5):1427-50. PubMed ID: 11292353
[TBL] [Abstract][Full Text] [Related]
18. Position of helical kinks in membrane protein crystal structures and the accuracy of computational prediction.
Hall SE; Roberts K; Vaidehi N
J Mol Graph Model; 2009; 27(8):944-50. PubMed ID: 19285892
[TBL] [Abstract][Full Text] [Related]
19. Energetics and stability of transmembrane helix packing: a replica-exchange simulation with a knowledge-based membrane potential.
Chen Z; Xu Y
Proteins; 2006 Feb; 62(2):539-52. PubMed ID: 16299775
[TBL] [Abstract][Full Text] [Related]
20. High-resolution prediction of protein helix positions and orientations.
Li X; Jacobson MP; Friesner RA
Proteins; 2004 May; 55(2):368-82. PubMed ID: 15048828
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
