BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

217 related articles for article (PubMed ID: 16845015)

  • 1. Protemot: prediction of protein binding sites with automatically extracted geometrical templates.
    Chang DT; Weng YZ; Lin JH; Hwang MJ; Oyang YJ
    Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W303-9. PubMed ID: 16845015
    [TBL] [Abstract][Full Text] [Related]  

  • 2. ProteMiner-SSM: a web server for efficient analysis of similar protein tertiary substructures.
    Chang DT; Chen CY; Chung WC; Oyang YJ; Juan HF; Huang HC
    Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W76-82. PubMed ID: 15215355
    [TBL] [Abstract][Full Text] [Related]  

  • 3. 3D-partner: a web server to infer interacting partners and binding models.
    Chen YC; Lo YS; Hsu WC; Yang JM
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W561-7. PubMed ID: 17517763
    [TBL] [Abstract][Full Text] [Related]  

  • 4. MEDock: a web server for efficient prediction of ligand binding sites based on a novel optimization algorithm.
    Chang DT; Oyang YJ; Lin JH
    Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W233-8. PubMed ID: 15991337
    [TBL] [Abstract][Full Text] [Related]  

  • 5. ProKware: integrated software for presenting protein structural properties in protein tertiary structures.
    Hung JH; Huang HD; Lee TY
    Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W89-94. PubMed ID: 16845116
    [TBL] [Abstract][Full Text] [Related]  

  • 6. PLI: a web-based tool for the comparison of protein-ligand interactions observed on PDB structures.
    Gallina AM; Bisignano P; Bergamino M; Bordo D
    Bioinformatics; 2013 Feb; 29(3):395-7. PubMed ID: 23196990
    [TBL] [Abstract][Full Text] [Related]  

  • 7. eF-seek: prediction of the functional sites of proteins by searching for similar electrostatic potential and molecular surface shape.
    Kinoshita K; Murakami Y; Nakamura H
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W398-402. PubMed ID: 17567616
    [TBL] [Abstract][Full Text] [Related]  

  • 8. fastSCOP: a fast web server for recognizing protein structural domains and SCOP superfamilies.
    Tung CH; Yang JM
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W438-43. PubMed ID: 17485476
    [TBL] [Abstract][Full Text] [Related]  

  • 9. DMAPS: a database of multiple alignments for protein structures.
    Guda C; Pal LR; Shindyalov IN
    Nucleic Acids Res; 2006 Jan; 34(Database issue):D273-6. PubMed ID: 16381863
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Structural templates for comparative protein docking.
    Anishchenko I; Kundrotas PJ; Tuzikov AV; Vakser IA
    Proteins; 2015 Sep; 83(9):1563-70. PubMed ID: 25488330
    [TBL] [Abstract][Full Text] [Related]  

  • 11. kinDOCK: a tool for comparative docking of protein kinase ligands.
    Martin L; Catherinot V; Labesse G
    Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W325-9. PubMed ID: 16845019
    [TBL] [Abstract][Full Text] [Related]  

  • 12. The SuMo server: 3D search for protein functional sites.
    Jambon M; Andrieu O; Combet C; Deléage G; Delfaud F; Geourjon C
    Bioinformatics; 2005 Oct; 21(20):3929-30. PubMed ID: 16141250
    [TBL] [Abstract][Full Text] [Related]  

  • 13. The PDB-Preview database: a repository of in-silico models of 'on-hold' PDB entries.
    Fischer D; Paś J; Rychlewski L
    Bioinformatics; 2004 Oct; 20(15):2482-4. PubMed ID: 15073011
    [TBL] [Abstract][Full Text] [Related]  

  • 14. CEP: a conformational epitope prediction server.
    Kulkarni-Kale U; Bhosle S; Kolaskar AS
    Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W168-71. PubMed ID: 15980448
    [TBL] [Abstract][Full Text] [Related]  

  • 15. ProtBuD: a database of biological unit structures of protein families and superfamilies.
    Xu Q; Canutescu A; Obradovic Z; Dunbrack RL
    Bioinformatics; 2006 Dec; 22(23):2876-82. PubMed ID: 17018535
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Meta-DP: domain prediction meta-server.
    Saini HK; Fischer D
    Bioinformatics; 2005 Jun; 21(12):2917-20. PubMed ID: 15840708
    [TBL] [Abstract][Full Text] [Related]  

  • 17. MODPROPEP: a program for knowledge-based modeling of protein-peptide complexes.
    Kumar N; Mohanty D
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W549-55. PubMed ID: 17478500
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Protein ligand interaction database (PLID).
    Reddy AS; Amarnath HS; Bapi RS; Sastry GM; Sastry GN
    Comput Biol Chem; 2008 Oct; 32(5):387-90. PubMed ID: 18514578
    [TBL] [Abstract][Full Text] [Related]  

  • 19. SCOWLP: a web-based database for detailed characterization and visualization of protein interfaces.
    Teyra J; Doms A; Schroeder M; Pisabarro MT
    BMC Bioinformatics; 2006 Mar; 7():104. PubMed ID: 16512892
    [TBL] [Abstract][Full Text] [Related]  

  • 20. MIB: Metal Ion-Binding Site Prediction and Docking Server.
    Lin YF; Cheng CW; Shih CS; Hwang JK; Yu CS; Lu CH
    J Chem Inf Model; 2016 Dec; 56(12):2287-2291. PubMed ID: 27976886
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.