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2. PupasView: a visual tool for selecting suitable SNPs, with putative pathological effect in genes, for genotyping purposes. Conde L; Vaquerizas JM; Ferrer-Costa C; de la Cruz X; Orozco M; Dopazo J Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W501-5. PubMed ID: 15980522 [TBL] [Abstract][Full Text] [Related]
3. PupaSNP Finder: a web tool for finding SNPs with putative effect at transcriptional level. Conde L; Vaquerizas JM; Santoyo J; Al-Shahrour F; Ruiz-Llorente S; Robledo M; Dopazo J Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W242-8. PubMed ID: 15215388 [TBL] [Abstract][Full Text] [Related]
4. Joint annotation of coding and non-coding single nucleotide polymorphisms and mutations in the SNPeffect and PupaSuite databases. Reumers J; Conde L; Medina I; Maurer-Stroh S; Van Durme J; Dopazo J; Rousseau F; Schymkowitz J Nucleic Acids Res; 2008 Jan; 36(Database issue):D825-9. PubMed ID: 18086700 [TBL] [Abstract][Full Text] [Related]
5. A tool for selecting SNPs for association studies based on observed linkage disequilibrium patterns. De La Vega FM; Isaac HI; Scafe CR Pac Symp Biocomput; 2006; ():487-98. PubMed ID: 17094263 [TBL] [Abstract][Full Text] [Related]
6. SNP-VISTA: an interactive SNP visualization tool. Shah N; Teplitsky MV; Minovitsky S; Pennacchio LA; Hugenholtz P; Hamann B; Dubchak IL BMC Bioinformatics; 2005 Dec; 6():292. PubMed ID: 16336665 [TBL] [Abstract][Full Text] [Related]
7. Combining functional and linkage disequilibrium information in the selection of tag SNPs. Sham PC; Ao SI; Kwan JS; Kao P; Cheung F; Fong PY; Ng MK Bioinformatics; 2007 Jan; 23(1):129-31. PubMed ID: 17060359 [TBL] [Abstract][Full Text] [Related]
8. SNP mining porcine ESTs with MAVIANT, a novel tool for SNP evaluation and annotation. Panitz F; Stengaard H; Hornshøj H; Gorodkin J; Hedegaard J; Cirera S; Thomsen B; Madsen LB; Høj A; Vingborg RK; Zahn B; Wang X; Wang X; Wernersson R; Jørgensen CB; Scheibye-Knudsen K; Arvin T; Lumholdt S; Sawera M; Green T; Nielsen BJ; Havgaard JH; Brunak S; Fredholm M; Bendixen C Bioinformatics; 2007 Jul; 23(13):i387-91. PubMed ID: 17646321 [TBL] [Abstract][Full Text] [Related]
9. SNPP: automating large-scale SNP genotype data management. Zhao LJ; Li MX; Guo YF; Xu FH; Li JL; Deng HW Bioinformatics; 2005 Jan; 21(2):266-8. PubMed ID: 15377503 [TBL] [Abstract][Full Text] [Related]
10. D-HaploDB: a database of definitive haplotypes determined by genotyping complete hydatidiform mole samples. Higasa K; Miyatake K; Kukita Y; Tahira T; Hayashi K Nucleic Acids Res; 2007 Jan; 35(Database issue):D685-9. PubMed ID: 17166862 [TBL] [Abstract][Full Text] [Related]
11. SNP analysis to results (SNPator): a web-based environment oriented to statistical genomics analyses upon SNP data. Morcillo-Suarez C; Alegre J; Sangros R; Gazave E; de Cid R; Milne R; Amigo J; Ferrer-Admetlla A; Moreno-Estrada A; Gardner M; Casals F; Pérez-Lezaun A; Comas D; Bosch E; Calafell F; Bertranpetit J; Navarro A Bioinformatics; 2008 Jul; 24(14):1643-4. PubMed ID: 18515823 [TBL] [Abstract][Full Text] [Related]
12. FESD: a Functional Element SNPs Database in human. Kang HJ; Choi KO; Kim BD; Kim S; Kim YJ Nucleic Acids Res; 2005 Jan; 33(Database issue):D518-22. PubMed ID: 15608252 [TBL] [Abstract][Full Text] [Related]
13. SNPHunter: a bioinformatic software for single nucleotide polymorphism data acquisition and management. Wang L; Liu S; Niu T; Xu X BMC Bioinformatics; 2005 Mar; 6():60. PubMed ID: 15774022 [TBL] [Abstract][Full Text] [Related]
14. SNP@Domain: a web resource of single nucleotide polymorphisms (SNPs) within protein domain structures and sequences. Han A; Kang HJ; Cho Y; Lee S; Kim YJ; Gong S Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W642-4. PubMed ID: 16845090 [TBL] [Abstract][Full Text] [Related]
15. Haploview: Visualization and analysis of SNP genotype data. Barrett JC Cold Spring Harb Protoc; 2009 Oct; 2009(10):pdb.ip71. PubMed ID: 20147036 [TBL] [Abstract][Full Text] [Related]
16. SNPsFinder--a web-based application for genome-wide discovery of single nucleotide polymorphisms in microbial genomes. Song J; Xu Y; White S; Miller KW; Wolinsky M Bioinformatics; 2005 May; 21(9):2083-4. PubMed ID: 15691853 [TBL] [Abstract][Full Text] [Related]
17. HaploPainter: a tool for drawing pedigrees with complex haplotypes. Thiele H; Nürnberg P Bioinformatics; 2005 Apr; 21(8):1730-2. PubMed ID: 15377505 [TBL] [Abstract][Full Text] [Related]
18. The impact of missing and erroneous genotypes on tagging SNP selection and power of subsequent association tests. Liu W; Zhao W; Chase GA Hum Hered; 2006; 61(1):31-44. PubMed ID: 16557026 [TBL] [Abstract][Full Text] [Related]
19. SNPeffect: a database mapping molecular phenotypic effects of human non-synonymous coding SNPs. Reumers J; Schymkowitz J; Ferkinghoff-Borg J; Stricher F; Serrano L; Rousseau F Nucleic Acids Res; 2005 Jan; 33(Database issue):D527-32. PubMed ID: 15608254 [TBL] [Abstract][Full Text] [Related]
20. Web-based primer design software for genome-scale genotyping by pyrosequencing. Ringquist S; Pecoraro C; Lu Y; Styche A; Rudert WA; Benos PV; Trucco M Methods Mol Biol; 2007; 373():25-38. PubMed ID: 17185755 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]