453 related articles for article (PubMed ID: 16851180)
1. Simple energy landscape model for the kinetics of functional transitions in proteins.
Miyashita O; Wolynes PG; Onuchic JN
J Phys Chem B; 2005 Feb; 109(5):1959-69. PubMed ID: 16851180
[TBL] [Abstract][Full Text] [Related]
2. Statistical mechanics of protein folding, unfolding and fluctuation.
Gło N
Adv Biophys; 1976; ():65-113. PubMed ID: 1015397
[TBL] [Abstract][Full Text] [Related]
3. Effective stochastic dynamics on a protein folding energy landscape.
Yang S; Onuchic JN; Levine H
J Chem Phys; 2006 Aug; 125(5):054910. PubMed ID: 16942260
[TBL] [Abstract][Full Text] [Related]
4. Towards a consistent modeling of protein thermodynamic and kinetic cooperativity: how applicable is the transition state picture to folding and unfolding?
Kaya H; Chan HS
J Mol Biol; 2002 Jan; 315(4):899-909. PubMed ID: 11812156
[TBL] [Abstract][Full Text] [Related]
5. Asymmetric kinetics of protein structural changes.
Marchal S; Font J; Ribó M; Vilanova M; Phillips RS; Lange R; Torrent J
Acc Chem Res; 2009 Jun; 42(6):778-87. PubMed ID: 19378977
[TBL] [Abstract][Full Text] [Related]
6. A study of density of states and ground states in hydrophobic-hydrophilic protein folding models by equi-energy sampling.
Kou SC; Oh J; Wong WH
J Chem Phys; 2006 Jun; 124(24):244903. PubMed ID: 16821999
[TBL] [Abstract][Full Text] [Related]
7. Molecular mechanisms of pH-driven conformational transitions of proteins: insights from continuum electrostatics calculations of acid unfolding.
Fitch CA; Whitten ST; Hilser VJ; García-Moreno E B
Proteins; 2006 Apr; 63(1):113-26. PubMed ID: 16400648
[TBL] [Abstract][Full Text] [Related]
8. Transition networks for modeling the kinetics of conformational change in macromolecules.
Noé F; Fischer S
Curr Opin Struct Biol; 2008 Apr; 18(2):154-62. PubMed ID: 18378442
[TBL] [Abstract][Full Text] [Related]
9. Theoretical analysis on changes in thermodynamic quantities upon protein folding: essential role of hydration.
Imai T; Harano Y; Kinoshita M; Kovalenko A; Hirata F
J Chem Phys; 2007 Jun; 126(22):225102. PubMed ID: 17581082
[TBL] [Abstract][Full Text] [Related]
10. Model for the nucleation mechanism of protein folding.
Djikaev YS; Ruckenstein E
J Phys Chem B; 2007 Feb; 111(4):886-97. PubMed ID: 17249833
[TBL] [Abstract][Full Text] [Related]
11. Single molecule conformational dynamics of adenylate kinase: energy landscape, structural correlations, and transition state ensembles.
Lu Q; Wang J
J Am Chem Soc; 2008 Apr; 130(14):4772-83. PubMed ID: 18338887
[TBL] [Abstract][Full Text] [Related]
12. Mosaic energy landscapes of liquids and the control of protein conformational dynamics by glass-forming solvents.
Lubchenko V; Wolynes PG; Frauenfelder H
J Phys Chem B; 2005 Apr; 109(15):7488-99. PubMed ID: 16851860
[TBL] [Abstract][Full Text] [Related]
13. Collective Langevin dynamics of conformational motions in proteins.
Lange OF; Grubmüller H
J Chem Phys; 2006 Jun; 124(21):214903. PubMed ID: 16774438
[TBL] [Abstract][Full Text] [Related]
14. A simple thermodynamic test to discriminate between two-state and downhill folding.
Oliva FY; Muñoz V
J Am Chem Soc; 2004 Jul; 126(28):8596-7. PubMed ID: 15250680
[TBL] [Abstract][Full Text] [Related]
15. Predicting order of conformational changes during protein conformational transitions using an interpolated elastic network model.
Tekpinar M; Zheng W
Proteins; 2010 Aug; 78(11):2469-81. PubMed ID: 20602461
[TBL] [Abstract][Full Text] [Related]
16. Thermodynamics and kinetics of the pressure unfolding of phosphoglycerate kinase.
Osváth S; Quynh LM; Smeller L
Biochemistry; 2009 Oct; 48(42):10146-50. PubMed ID: 19775155
[TBL] [Abstract][Full Text] [Related]
17. Protein mechanical unfolding: a model with binary variables.
Imparato A; Pelizzola A; Zamparo M
J Chem Phys; 2007 Oct; 127(14):145105. PubMed ID: 17935449
[TBL] [Abstract][Full Text] [Related]
18. A skewed-momenta method to efficiently generate conformational-transition trajectories.
MacFadyen J; Andricioaei I
J Chem Phys; 2005 Aug; 123(7):074107. PubMed ID: 16229559
[TBL] [Abstract][Full Text] [Related]
19. Selected-fit versus induced-fit protein binding: kinetic differences and mutational analysis.
Weikl TR; von Deuster C
Proteins; 2009 Apr; 75(1):104-10. PubMed ID: 18798570
[TBL] [Abstract][Full Text] [Related]
20. Free-energy landscapes of protein domain movements upon ligand binding.
Kondo HX; Okimoto N; Morimoto G; Taiji M
J Phys Chem B; 2011 Jun; 115(23):7629-36. PubMed ID: 21608983
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
