These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

146 related articles for article (PubMed ID: 16852731)

  • 1. Theoretical studies of dissociative phosphoryl transfer in interconversion of phosphoenolpyruvate to phosphonopyruvate: solvent effects, thio effects, and implications for enzymatic reactions.
    Xu D; Guo H; Liu Y; York DM
    J Phys Chem B; 2005 Jul; 109(28):13827-34. PubMed ID: 16852731
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Ab initio QM/MM studies of the phosphoryl transfer reaction catalyzed by PEP mutase suggest a dissociative metaphosphate transition state.
    Xu D; Guo H
    J Phys Chem B; 2008 Apr; 112(13):4102-8. PubMed ID: 18331021
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Smooth solvation method for d-orbital semiempirical calculations of biological reactions. 1. Implementation.
    Khandogin J; Gregersen BA; Thiel W; York DM
    J Phys Chem B; 2005 May; 109(19):9799-809. PubMed ID: 16852180
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Phosphoenolpyruvate mutase catalysis of phosphoryl transfer in phosphoenolpyruvate: kinetics and mechanism of phosphorus-carbon bond formation.
    Kim J; Dunaway-Mariano D
    Biochemistry; 1996 Apr; 35(14):4628-35. PubMed ID: 8605214
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Hybrid QM/MM study of thio effects in transphosphorylation reactions: the role of solvation.
    Gregersen BA; Lopez X; York DM
    J Am Chem Soc; 2004 Jun; 126(24):7504-13. PubMed ID: 15198597
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Smooth solvation method for d-orbital semiempirical calculations of biological reactions. 2. Application to transphosphorylation thio effects in solution.
    Gregersen BA; Khandogin J; Thiel W; York DM
    J Phys Chem B; 2005 May; 109(19):9810-7. PubMed ID: 16852181
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Density functional theory of solvation and its relation to implicit solvent models.
    Ramirez R; Borgis D
    J Phys Chem B; 2005 Apr; 109(14):6754-63. PubMed ID: 16851760
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Quantum mechanics/molecular mechanics minimum free-energy path for accurate reaction energetics in solution and enzymes: sequential sampling and optimization on the potential of mean force surface.
    Hu H; Lu Z; Parks JM; Burger SK; Yang W
    J Chem Phys; 2008 Jan; 128(3):034105. PubMed ID: 18205486
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Nucleophilic attack on phosphate diesters: a density functional study of in-line reactivity in dianionic, monoanionic, and neutral systems.
    Lopez X; Dejaegere A; Leclerc F; York DM; Karplus M
    J Phys Chem B; 2006 Jun; 110(23):11525-39. PubMed ID: 16771429
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Conformational preferences of proline oligopeptides.
    Kang YK; Jhon JS; Park HS
    J Phys Chem B; 2006 Sep; 110(35):17645-55. PubMed ID: 16942110
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Energy contribution of the solvent to the charge migration in DNA.
    Berashevich JA; Chakraborty T
    J Chem Phys; 2007 Jan; 126(3):035104. PubMed ID: 17249903
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Two-metal-ion mechanism for hammerhead-ribozyme catalysis.
    Leclerc F; Karplus M
    J Phys Chem B; 2006 Feb; 110(7):3395-409. PubMed ID: 16494354
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Theoretical studies on the thermodynamics and kinetics of the N-glycosidic bond cleavage in deoxythymidine glycol.
    Chen ZQ; Zhang CH; Xue Y
    J Phys Chem B; 2009 Jul; 113(30):10409-20. PubMed ID: 19719287
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Nuclear quantum effects on an enzyme-catalyzed reaction with reaction path potential: proton transfer in triosephosphate isomerase.
    Wang M; Lu Z; Yang W
    J Chem Phys; 2006 Mar; 124(12):124516. PubMed ID: 16599706
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Ab initio procedure for aqueous-phase pKa calculation: the acidity of nitrous acid.
    da Silva G; Kennedy EM; Dlugogorski BZ
    J Phys Chem A; 2006 Oct; 110(39):11371-6. PubMed ID: 17004748
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Alkali metals (Li, Na, and K) in methyl phosphodiester hydrolysis.
    Pinjari RV; Kaptan SS; Gejji SP
    Phys Chem Chem Phys; 2009 Jul; 11(26):5253-62. PubMed ID: 19551192
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Density functional theory study of the platinum-catalyzed cyclopropanation reaction with olefin.
    Geng Z; Yan P; Wang Y; Yao X; Han Y; Liang J
    J Phys Chem A; 2007 Oct; 111(39):9961-8. PubMed ID: 17760428
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Density functional study of the in-line mechanism of methanolysis of cyclic phosphate and thiophosphate esters in solution: insight into thio effects in RNA transesterification.
    Liu Y; Gregersen BA; Lopez X; York DM
    J Phys Chem B; 2005 Oct; 109(42):19987-20003. PubMed ID: 16853584
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Theoretical studies on the hydrolysis mechanism of N-(2-oxo-1,2-dihydro-pyrimidinyl) formamide.
    Wu Y; Xue Y; Xie DQ; Kim CK; Yan GS
    J Phys Chem B; 2007 Mar; 111(9):2357-64. PubMed ID: 17295531
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Dynamic salt effect on intramolecular charge-transfer reactions.
    Zhu J; Ma R; Lu Y; Stell G
    J Chem Phys; 2005 Dec; 123(22):224505. PubMed ID: 16375487
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.