These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

166 related articles for article (PubMed ID: 16863332)

  • 1. Facilitated diffusion of DNA-binding proteins: Simulation of large systems.
    Merlitz H; Klenin KV; Wu CX; Langowski J
    J Chem Phys; 2006 Jul; 125(1):014906. PubMed ID: 16863332
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Facilitated diffusion of DNA-binding proteins: efficient simulation with the method of excess collisions.
    Merlitz H; Klenin KV; Wu CX; Langowski J
    J Chem Phys; 2006 Apr; 124(13):134908. PubMed ID: 16613478
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Facilitated diffusion on confined DNA.
    Foffano G; Marenduzzo D; Orlandini E
    Phys Rev E Stat Nonlin Soft Matter Phys; 2012 Feb; 85(2 Pt 1):021919. PubMed ID: 22463256
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Modeling of intramolecular reactions of polymers: an efficient method based on Brownian dynamics simulations.
    Klenin KV; Langowski J
    J Chem Phys; 2004 Sep; 121(10):4951-60. PubMed ID: 15332931
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Prediction of DNA-binding residues from sequence.
    Ofran Y; Mysore V; Rost B
    Bioinformatics; 2007 Jul; 23(13):i347-53. PubMed ID: 17646316
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Fast-scanning atomic force microscopy reveals the molecular mechanism of DNA cleavage by ApaI endonuclease.
    Yokokawa M; Yoshimura SH; Naito Y; Ando T; Yagi A; Sakai N; Takeyasu K
    IEE Proc Nanobiotechnol; 2006 Aug; 153(4):60-6. PubMed ID: 16948489
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Coarse-grained models for proteins.
    Tozzini V
    Curr Opin Struct Biol; 2005 Apr; 15(2):144-50. PubMed ID: 15837171
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Replica exchange molecular dynamics simulations of amyloid peptide aggregation.
    Cecchini M; Rao F; Seeber M; Caflisch A
    J Chem Phys; 2004 Dec; 121(21):10748-56. PubMed ID: 15549960
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Comparative footprinting of DNA-binding proteins.
    Contreras-Moreira B; Collado-Vides J
    Bioinformatics; 2006 Jul; 22(14):e74-80. PubMed ID: 16873524
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Modeling directed ligand passage toward enzyme active site by a 'double cellular automata' model.
    Marashi SA; Behrouzi R
    Biochem Biophys Res Commun; 2005 Jul; 333(1):1-4. PubMed ID: 15958207
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Comparison of kinetic and dynamical models of DNA-protein interaction and facilitated diffusion.
    Florescu AM; Joyeux M
    J Phys Chem A; 2010 Sep; 114(36):9662-72. PubMed ID: 20394450
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Protein sliding and hopping kinetics on DNA.
    DeSantis MC; Li JL; Wang YM
    Phys Rev E Stat Nonlin Soft Matter Phys; 2011 Feb; 83(2 Pt 1):021907. PubMed ID: 21405863
    [TBL] [Abstract][Full Text] [Related]  

  • 13. A universal TANGO?
    Pande VS
    Nat Biotechnol; 2004 Oct; 22(10):1240-1. PubMed ID: 15470460
    [No Abstract]   [Full Text] [Related]  

  • 14. Analysis of protein-DNA interactions using surface plasmon resonance.
    Majka J; Speck C
    Adv Biochem Eng Biotechnol; 2007; 104():13-36. PubMed ID: 17290817
    [TBL] [Abstract][Full Text] [Related]  

  • 15. The effects of intersegmental transfers on target location by proteins.
    Sheinman M; Kafri Y
    Phys Biol; 2009 Jan; 6(1):016003. PubMed ID: 19151476
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Protein folding stabilizing time measurement: a direct folding process and three-dimensional random walk simulation.
    Chang CC; Lin PY; Yeh XC; Deng KH; Ho YP; Kan LS
    Biochem Biophys Res Commun; 2005 Mar; 328(4):845-50. PubMed ID: 15707956
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Multiprotein DNA looping.
    Vilar JM; Saiz L
    Phys Rev Lett; 2006 Jun; 96(23):238103. PubMed ID: 16803410
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Implicit solvent simulations of DNA and DNA-protein complexes: agreement with explicit solvent vs experiment.
    Chocholousová J; Feig M
    J Phys Chem B; 2006 Aug; 110(34):17240-51. PubMed ID: 16928023
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Protein association with circular DNA: rate enhancement by nonspecific binding.
    Alsallaq R; Zhou HX
    J Chem Phys; 2008 Mar; 128(11):115108. PubMed ID: 18361623
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Description of nonspecific DNA-protein interaction and facilitated diffusion with a dynamical model.
    Florescu AM; Joyeux M
    J Chem Phys; 2009 Jan; 130(1):015103. PubMed ID: 19140636
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.