BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

403 related articles for article (PubMed ID: 16895925)

  • 1. Robust inference of positive selection from recombining coding sequences.
    Scheffler K; Martin DP; Seoighe C
    Bioinformatics; 2006 Oct; 22(20):2493-9. PubMed ID: 16895925
    [TBL] [Abstract][Full Text] [Related]  

  • 2. GARD: a genetic algorithm for recombination detection.
    Kosakovsky Pond SL; Posada D; Gravenor MB; Woelk CH; Frost SD
    Bioinformatics; 2006 Dec; 22(24):3096-8. PubMed ID: 17110367
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Discriminating between rate heterogeneity and interspecific recombination in DNA sequence alignments with phylogenetic factorial hidden Markov models.
    Husmeier D
    Bioinformatics; 2005 Sep; 21 Suppl 2():ii166-72. PubMed ID: 16204097
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Evolutionary simulations to detect functional lineage-specific genes.
    Dupanloup I; Kaessmann H
    Bioinformatics; 2006 Aug; 22(15):1815-22. PubMed ID: 16766551
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Computing recombination networks from binary sequences.
    Huson DH; Kloepper TH
    Bioinformatics; 2005 Sep; 21 Suppl 2():ii159-65. PubMed ID: 16204096
    [TBL] [Abstract][Full Text] [Related]  

  • 6. A model of directional selection applied to the evolution of drug resistance in HIV-1.
    Seoighe C; Ketwaroo F; Pillay V; Scheffler K; Wood N; Duffet R; Zvelebil M; Martinson N; McIntyre J; Morris L; Hide W
    Mol Biol Evol; 2007 Apr; 24(4):1025-31. PubMed ID: 17272680
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Analysis of recombination and natural selection in human enterovirus 71.
    Chen X; Zhang Q; Li J; Cao W; Zhang JX; Zhang L; Zhang W; Shao ZJ; Yan Y
    Virology; 2010 Mar; 398(2):251-61. PubMed ID: 20060995
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Detecting interspecific recombination with a pruned probabilistic divergence measure.
    Husmeier D; Wright F; Milne I
    Bioinformatics; 2005 May; 21(9):1797-806. PubMed ID: 15572473
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Tracing evolutionary pressure.
    Ye K; Vriend G; IJzerman AP
    Bioinformatics; 2008 Apr; 24(7):908-15. PubMed ID: 18304936
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Maximum likelihood of phylogenetic networks.
    Jin G; Nakhleh L; Snir S; Tuller T
    Bioinformatics; 2006 Nov; 22(21):2604-11. PubMed ID: 16928736
    [TBL] [Abstract][Full Text] [Related]  

  • 11. RDP2: recombination detection and analysis from sequence alignments.
    Martin DP; Williamson C; Posada D
    Bioinformatics; 2005 Jan; 21(2):260-2. PubMed ID: 15377507
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Sliding MinPD: building evolutionary networks of serial samples via an automated recombination detection approach.
    Buendia P; Narasimhan G
    Bioinformatics; 2007 Nov; 23(22):2993-3000. PubMed ID: 17717035
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Frequent false detection of positive selection by the likelihood method with branch-site models.
    Zhang J
    Mol Biol Evol; 2004 Jul; 21(7):1332-9. PubMed ID: 15014150
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Phylogenetic relationships and molecular adaptation dynamics of human rhinoviruses.
    Lewis-Rogers N; Bendall ML; Crandall KA
    Mol Biol Evol; 2009 May; 26(5):969-81. PubMed ID: 19182223
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Automated phylogenetic detection of recombination using a genetic algorithm.
    Kosakovsky Pond SL; Posada D; Gravenor MB; Woelk CH; Frost SD
    Mol Biol Evol; 2006 Oct; 23(10):1891-901. PubMed ID: 16818476
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Statistical properties of the branch-site test of positive selection.
    Yang Z; dos Reis M
    Mol Biol Evol; 2011 Mar; 28(3):1217-28. PubMed ID: 21087944
    [TBL] [Abstract][Full Text] [Related]  

  • 17. A novel feature-based method for whole genome phylogenetic analysis without alignment: application to HEV genotyping and subtyping.
    Liu Z; Meng J; Sun X
    Biochem Biophys Res Commun; 2008 Apr; 368(2):223-30. PubMed ID: 18230342
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Detecting recombination and diversifying selection in human alpha-papillomavirus.
    Carvajal-Rodríguez A
    Infect Genet Evol; 2008 Sep; 8(5):689-92. PubMed ID: 18675939
    [TBL] [Abstract][Full Text] [Related]  

  • 19. A weighted least-squares approach for inferring phylogenies from incomplete distance matrices.
    Makarenkov V; Lapointe FJ
    Bioinformatics; 2004 Sep; 20(13):2113-21. PubMed ID: 15059836
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Phylogenetic and evolutionary analyses of St. Louis encephalitis virus genomes.
    Baillie GJ; Kolokotronis SO; Waltari E; Maffei JG; Kramer LD; Perkins SL
    Mol Phylogenet Evol; 2008 May; 47(2):717-28. PubMed ID: 18374605
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 21.