369 related articles for article (PubMed ID: 16914448)
1. Comprehensive splice-site analysis using comparative genomics.
Sheth N; Roca X; Hastings ML; Roeder T; Krainer AR; Sachidanandam R
Nucleic Acids Res; 2006; 34(14):3955-67. PubMed ID: 16914448
[TBL] [Abstract][Full Text] [Related]
2. Using profiles based on nucleotide hydrophobicity to define essential regions for splicing.
Boldina G; Ivashchenko A; Régnier M
Int J Biol Sci; 2009; 5(1):13-9. PubMed ID: 19119309
[TBL] [Abstract][Full Text] [Related]
3. Characterization of the splice sites in GT-AG and GC-AG introns in higher eukaryotes using full-length cDNAs.
Kitamura-Abe S; Itoh H; Washio T; Tsutsumi A; Tomita M
J Bioinform Comput Biol; 2004 Jun; 2(2):309-31. PubMed ID: 15297984
[TBL] [Abstract][Full Text] [Related]
4. Global analysis of binding sites of U2AF1 and ZRSR2 reveals RNA elements required for mutually exclusive splicing by the U2- and U12-type spliceosome.
Kwon YS; Jin SW; Song H
Nucleic Acids Res; 2024 Feb; 52(3):1420-1434. PubMed ID: 38088204
[TBL] [Abstract][Full Text] [Related]
5. Evolutionary fates and origins of U12-type introns.
Burge CB; Padgett RA; Sharp PA
Mol Cell; 1998 Dec; 2(6):773-85. PubMed ID: 9885565
[TBL] [Abstract][Full Text] [Related]
6. Identification, characterization and molecular phylogeny of U12-dependent introns in the Arabidopsis thaliana genome.
Zhu W; Brendel V
Nucleic Acids Res; 2003 Aug; 31(15):4561-72. PubMed ID: 12888517
[TBL] [Abstract][Full Text] [Related]
7. Evolutionary dynamics of U12-type spliceosomal introns.
Lin CF; Mount SM; Jarmołowski A; Makałowski W
BMC Evol Biol; 2010 Feb; 10():47. PubMed ID: 20163699
[TBL] [Abstract][Full Text] [Related]
8. Genome-wide analyses supported by RNA-Seq reveal non-canonical splice sites in plant genomes.
Pucker B; Brockington SF
BMC Genomics; 2018 Dec; 19(1):980. PubMed ID: 30594132
[TBL] [Abstract][Full Text] [Related]
9. A computational analysis of sequence features involved in recognition of short introns.
Lim LP; Burge CB
Proc Natl Acad Sci U S A; 2001 Sep; 98(20):11193-8. PubMed ID: 11572975
[TBL] [Abstract][Full Text] [Related]
10. A comprehensive survey of non-canonical splice sites in the human transcriptome.
Parada GE; Munita R; Cerda CA; Gysling K
Nucleic Acids Res; 2014; 42(16):10564-78. PubMed ID: 25123659
[TBL] [Abstract][Full Text] [Related]
11. Terminal intron dinucleotide sequences do not distinguish between U2- and U12-dependent introns.
Dietrich RC; Incorvaia R; Padgett RA
Mol Cell; 1997 Dec; 1(1):151-60. PubMed ID: 9659912
[TBL] [Abstract][Full Text] [Related]
12. Comparison of splice sites in mammals and chicken.
Abril JF; Castelo R; Guigó R
Genome Res; 2005 Jan; 15(1):111-9. PubMed ID: 15590946
[TBL] [Abstract][Full Text] [Related]
13. Aberrant 3' splice sites in human disease genes: mutation pattern, nucleotide structure and comparison of computational tools that predict their utilization.
Vorechovský I
Nucleic Acids Res; 2006; 34(16):4630-41. PubMed ID: 16963498
[TBL] [Abstract][Full Text] [Related]
14. Comparative analysis of sequence features involved in the recognition of tandem splice sites.
Bortfeldt R; Schindler S; Szafranski K; Schuster S; Holste D
BMC Genomics; 2008 Apr; 9():202. PubMed ID: 18447903
[TBL] [Abstract][Full Text] [Related]
15. Biased exon/intron distribution of cryptic and de novo 3' splice sites.
Královicová J; Christensen MB; Vorechovský I
Nucleic Acids Res; 2005; 33(15):4882-98. PubMed ID: 16141195
[TBL] [Abstract][Full Text] [Related]
16. Analysis of the role of Caenorhabditis elegans GC-AG introns in regulated splicing.
Farrer T; Roller AB; Kent WJ; Zahler AM
Nucleic Acids Res; 2002 Aug; 30(15):3360-7. PubMed ID: 12140320
[TBL] [Abstract][Full Text] [Related]
17. Splice site prediction with quadratic discriminant analysis using diversity measure.
Zhang L; Luo L
Nucleic Acids Res; 2003 Nov; 31(21):6214-20. PubMed ID: 14576308
[TBL] [Abstract][Full Text] [Related]
18. Splicing Enhancers at Intron-Exon Borders Participate in Acceptor Splice Sites Recognition.
Kováčová T; Souček P; Hujová P; Freiberger T; Grodecká L
Int J Mol Sci; 2020 Sep; 21(18):. PubMed ID: 32911621
[TBL] [Abstract][Full Text] [Related]
19. U12 snRNA in vertebrates: evolutionary conservation of 5' sequences implicated in splicing of pre-mRNAs containing a minor class of introns.
Tarn WY; Yario TA; Steitz JA
RNA; 1995 Aug; 1(6):644-56. PubMed ID: 7489523
[TBL] [Abstract][Full Text] [Related]
20. Alternative splicing and bioinformatic analysis of human U12-type introns.
Chang WC; Chen YC; Lee KM; Tarn WY
Nucleic Acids Res; 2007; 35(6):1833-41. PubMed ID: 17332017
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]