These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
287 related articles for article (PubMed ID: 16917862)
41. Complexity of free energy landscapes of peptides revealed by nonlinear principal component analysis. Nguyen PH Proteins; 2006 Dec; 65(4):898-913. PubMed ID: 17034036 [TBL] [Abstract][Full Text] [Related]
42. Prediction of nitroxide hyperfine coupling constants in solution from combined nanosecond scale simulations and quantum computations. Houriez C; Ferré N; Masella M; Siri D J Chem Phys; 2008 Jun; 128(24):244504. PubMed ID: 18601346 [TBL] [Abstract][Full Text] [Related]
43. Can principal components yield a dimension reduced description of protein dynamics on long time scales? Lange OF; Grubmüller H J Phys Chem B; 2006 Nov; 110(45):22842-52. PubMed ID: 17092036 [TBL] [Abstract][Full Text] [Related]
45. New insights into the meaning and usefulness of principal component analysis of concatenated trajectories. Pierdominici-Sottile G; Palma J J Comput Chem; 2015 Mar; 36(7):424-32. PubMed ID: 25516482 [TBL] [Abstract][Full Text] [Related]
46. JED: a Java Essential Dynamics Program for comparative analysis of protein trajectories. David CC; Singam ERA; Jacobs DJ BMC Bioinformatics; 2017 May; 18(1):271. PubMed ID: 28545397 [TBL] [Abstract][Full Text] [Related]
47. Strongly anisotropic orientational relaxation of water molecules in narrow carbon nanotubes and nanorings. Mukherjee B; Maiti PK; Dasgupta C; Sood AK ACS Nano; 2008 Jun; 2(6):1189-96. PubMed ID: 19206336 [TBL] [Abstract][Full Text] [Related]
48. Free-energy landscape, principal component analysis, and structural clustering to identify representative conformations from molecular dynamics simulations: the myoglobin case. Papaleo E; Mereghetti P; Fantucci P; Grandori R; De Gioia L J Mol Graph Model; 2009; 27(8):889-99. PubMed ID: 19264523 [TBL] [Abstract][Full Text] [Related]
49. Dynamics, hydration, and motional averaging of a loop-gated artificial protein cavity: the W191G mutant of cytochrome c peroxidase in water as revealed by molecular dynamics simulations. Baron R; McCammon JA Biochemistry; 2007 Sep; 46(37):10629-42. PubMed ID: 17718514 [TBL] [Abstract][Full Text] [Related]
50. Molecular conformational space analysis using computer graphics: going beyond FRODO. Nilsson O J Mol Graph; 1990 Dec; 8(4):192-200, 212-3. PubMed ID: 2282358 [TBL] [Abstract][Full Text] [Related]
51. MatrixExplorer: a dual-representation system to explore social networks. Henry N; Fekete JD IEEE Trans Vis Comput Graph; 2006; 12(5):677-84. PubMed ID: 17080787 [TBL] [Abstract][Full Text] [Related]
52. A network of conserved interactions regulates the allosteric signal in a glutamine amidotransferase. Amaro RE; Sethi A; Myers RS; Davisson VJ; Luthey-Schulten ZA Biochemistry; 2007 Feb; 46(8):2156-73. PubMed ID: 17261030 [TBL] [Abstract][Full Text] [Related]
53. Toward realistic modeling of dynamic processes in cell signaling: quantification of macromolecular crowding effects. Sun J; Weinstein H J Chem Phys; 2007 Oct; 127(15):155105. PubMed ID: 17949221 [TBL] [Abstract][Full Text] [Related]
54. Construction of the free energy landscape of biomolecules via dihedral angle principal component analysis. Altis A; Otten M; Nguyen PH; Hegger R; Stock G J Chem Phys; 2008 Jun; 128(24):245102. PubMed ID: 18601386 [TBL] [Abstract][Full Text] [Related]
55. A computer simulation study of stick-slip transitions in water films confined between model hydrophilic surfaces. 1. Monolayer films. Pertsin A; Grunze M Langmuir; 2008 Jan; 24(1):135-41. PubMed ID: 18047380 [TBL] [Abstract][Full Text] [Related]
56. Molecular dynamics simulation and thermodynamic modeling of the self-assembly of the triterpenoids asiatic acid and madecassic acid in aqueous solution. Stephenson BC; Goldsipe A; Blankschtein D J Phys Chem B; 2008 Feb; 112(8):2357-71. PubMed ID: 18247591 [TBL] [Abstract][Full Text] [Related]
57. Patient-specific IMRT verification using independent fluence-based dose calculation software: experimental benchmarking and initial clinical experience. Georg D; Stock M; Kroupa B; Olofsson J; Nyholm T; Ahnesjö A; Karlsson M Phys Med Biol; 2007 Aug; 52(16):4981-92. PubMed ID: 17671348 [TBL] [Abstract][Full Text] [Related]
58. Considerations in video playback design: using optic flow analysis to examine motion characteristics of live and computer-generated animation sequences. Woo KL; Rieucau G Behav Processes; 2008 Jul; 78(3):455-63. PubMed ID: 18440163 [TBL] [Abstract][Full Text] [Related]
59. Spherical electron cloud hopping molecular dynamics simulation on dissociative recombination of protonated water. Yu HG J Phys Chem A; 2009 Jun; 113(24):6555-61. PubMed ID: 19469513 [TBL] [Abstract][Full Text] [Related]
60. [Blind source separation for fMRI signals using a new independent component analysis algorithm and principal component analysis]. Zhang W; Shi Z; Tang H; Tang Y Sheng Wu Yi Xue Gong Cheng Xue Za Zhi; 2007 Apr; 24(2):430-3. PubMed ID: 17591275 [TBL] [Abstract][Full Text] [Related] [Previous] [Next] [New Search]