These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

190 related articles for article (PubMed ID: 16920827)

  • 1. Optimization of a stochastically simulated gene network model via simulated annealing.
    Tomshine J; Kaznessis YN
    Biophys J; 2006 Nov; 91(9):3196-205. PubMed ID: 16920827
    [TBL] [Abstract][Full Text] [Related]  

  • 2. SGN Sim, a stochastic genetic networks simulator.
    Ribeiro AS; Lloyd-Price J
    Bioinformatics; 2007 Mar; 23(6):777-9. PubMed ID: 17267430
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Dizzy: stochastic simulation of large-scale genetic regulatory networks.
    Ramsey S; Orrell D; Bolouri H
    J Bioinform Comput Biol; 2005 Apr; 3(2):415-36. PubMed ID: 15852513
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Probabilistic representation of gene regulatory networks.
    Mao L; Resat H
    Bioinformatics; 2004 Sep; 20(14):2258-69. PubMed ID: 15073019
    [TBL] [Abstract][Full Text] [Related]  

  • 5. On the attenuation and amplification of molecular noise in genetic regulatory networks.
    Chen BS; Wang YC
    BMC Bioinformatics; 2006 Feb; 7():52. PubMed ID: 16457708
    [TBL] [Abstract][Full Text] [Related]  

  • 6. In silico simulation of biological network dynamics.
    Salwinski L; Eisenberg D
    Nat Biotechnol; 2004 Aug; 22(8):1017-9. PubMed ID: 15235611
    [TBL] [Abstract][Full Text] [Related]  

  • 7. A Hybrid of the Chemical Master Equation and the Gillespie Algorithm for Efficient Stochastic Simulations of Sub-Networks.
    Albert J
    PLoS One; 2016; 11(3):e0149909. PubMed ID: 26930199
    [TBL] [Abstract][Full Text] [Related]  

  • 8. A method for estimating stochastic noise in large genetic regulatory networks.
    Orrell D; Ramsey S; de Atauri P; Bolouri H
    Bioinformatics; 2005 Jan; 21(2):208-17. PubMed ID: 15319259
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Differential simulated annealing: a robust and efficient global optimization algorithm for parameter estimation of biological networks.
    Dai Z; Lai L
    Mol Biosyst; 2014 Jun; 10(6):1385-92. PubMed ID: 24714701
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Model-driven designs of an oscillating gene network.
    Tuttle LM; Salis H; Tomshine J; Kaznessis YN
    Biophys J; 2005 Dec; 89(6):3873-83. PubMed ID: 16183880
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Studying genetic regulatory networks at the molecular level: delayed reaction stochastic models.
    Zhu R; Ribeiro AS; Salahub D; Kauffman SA
    J Theor Biol; 2007 Jun; 246(4):725-45. PubMed ID: 17350653
    [TBL] [Abstract][Full Text] [Related]  

  • 12. The need for speed in stochastic simulation.
    Lok L
    Nat Biotechnol; 2004 Aug; 22(8):964-5. PubMed ID: 15286647
    [No Abstract]   [Full Text] [Related]  

  • 13. Core genetic module: the mixed feedback loop.
    François P; Hakim V
    Phys Rev E Stat Nonlin Soft Matter Phys; 2005 Sep; 72(3 Pt 1):031908. PubMed ID: 16241483
    [TBL] [Abstract][Full Text] [Related]  

  • 14. "Winner takes it all": strongest node rule for evolution of scale-free networks.
    Stefancić H; Zlatić V
    Phys Rev E Stat Nonlin Soft Matter Phys; 2005 Sep; 72(3 Pt 2):036105. PubMed ID: 16241513
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Hardware prototypes of a Boolean neural network and the simulated annealing optimization method.
    Niittylahti J
    Int J Neural Syst; 1996 Mar; 7(1):45-52. PubMed ID: 8828049
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Stochastic simulations of genetic switch systems.
    Loinger A; Lipshtat A; Balaban NQ; Biham O
    Phys Rev E Stat Nonlin Soft Matter Phys; 2007 Feb; 75(2 Pt 1):021904. PubMed ID: 17358364
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Dizzy: stochastic simulation of large-scale genetic regulatory networks (supplementary material).
    Ramsey S; Orrell D; Bolouri H
    J Bioinform Comput Biol; 2005 Apr; 3(2):437-54. PubMed ID: 15852514
    [No Abstract]   [Full Text] [Related]  

  • 18. Relevance of phenotypic noise to adaptation and evolution.
    Kaneko K; Furusawa C
    IET Syst Biol; 2008 Sep; 2(5):234-46. PubMed ID: 19045819
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Stochastically driven genetic circuits.
    Tsimring LS; Volfson D; Hasty J
    Chaos; 2006 Jun; 16(2):026103. PubMed ID: 16822035
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Dynamics of a two-dimensional model of cell tissues with coupled stochastic gene networks.
    Ribeiro AS
    Phys Rev E Stat Nonlin Soft Matter Phys; 2007 Nov; 76(5 Pt 1):051915. PubMed ID: 18233695
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.