These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

116 related articles for article (PubMed ID: 16935301)

  • 21. Consensus features in amyloid fibrils: sheet-sheet recognition via a (polar or nonpolar) zipper structure.
    Zheng J; Ma B; Nussinov R
    Phys Biol; 2006 Oct; 3(3):P1-4. PubMed ID: 17021379
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Statistical analysis of protein structures suggests that buried ionizable residues in proteins are hydrogen bonded or form salt bridges.
    Bush J; Makhatadze GI
    Proteins; 2011 Jul; 79(7):2027-32. PubMed ID: 21560169
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Amyloid fibril formation propensity is inherent into the hexapeptide tandemly repeating sequence of the central domain of silkmoth chorion proteins of the A-family.
    Iconomidou VA; Chryssikos GD; Gionis V; Galanis AS; Cordopatis P; Hoenger A; Hamodrakas SJ
    J Struct Biol; 2006 Dec; 156(3):480-8. PubMed ID: 17056273
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Are acidic and basic groups in buried proteins predicted to be ionized?
    Kim J; Mao J; Gunner MR
    J Mol Biol; 2005 May; 348(5):1283-98. PubMed ID: 15854661
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Structural determinants of the rate of protein evolution in yeast.
    Bloom JD; Drummond DA; Arnold FH; Wilke CO
    Mol Biol Evol; 2006 Sep; 23(9):1751-61. PubMed ID: 16782762
    [TBL] [Abstract][Full Text] [Related]  

  • 26. [A search for amyloidogenic regions in protein chain].
    Galzitskaia OV; Garbuzinskiĭ SA; Lobanov MIu
    Mol Biol (Mosk); 2006; 40(5):910-8. PubMed ID: 17086993
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Residual structures in the acid-unfolded states of Vlambda6 proteins affect amyloid fibrillation.
    Mishima T; Ohkuri T; Monji A; Kanemaru T; Abe Y; Ueda T
    J Mol Biol; 2009 Oct; 392(4):1033-43. PubMed ID: 19647748
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Insights from modeling protein evolution with context-dependent mutation and asymmetric amino acid selection.
    Saunders CT; Green P
    Mol Biol Evol; 2007 Dec; 24(12):2632-47. PubMed ID: 17906001
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Effect of an amyloidogenic sequence attached to yellow fluorescent protein.
    Hamada D; Tsumoto K; Sawara M; Tanaka N; Nakahira K; Shiraki K; Yanagihara I
    Proteins; 2008 Aug; 72(3):811-21. PubMed ID: 18260107
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Hydrogen/deuterium exchange mass spectrometry analysis of protein aggregates.
    Kheterpal I; Cook KD; Wetzel R
    Methods Enzymol; 2006; 413():140-66. PubMed ID: 17046395
    [TBL] [Abstract][Full Text] [Related]  

  • 31. A molecular dynamics study of the interaction of D-peptide amyloid inhibitors with their target sequence reveals a potential inhibitory pharmacophore conformation.
    Esteras-Chopo A; Morra G; Moroni E; Serrano L; Lopez de la Paz M; Colombo G
    J Mol Biol; 2008 Oct; 383(1):266-80. PubMed ID: 18703072
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Correlation between the structural stability and aggregation propensity of proteins.
    Idicula-Thomas S; Balaji PV
    In Silico Biol; 2007; 7(2):225-37. PubMed ID: 17688448
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Environmental factors differently affect human and rat IAPP: conformational preferences and membrane interactions of IAPP17-29 peptide derivatives.
    Pappalardo G; Milardi D; Magrì A; Attanasio F; Impellizzeri G; La Rosa C; Grasso D; Rizzarelli E
    Chemistry; 2007; 13(36):10204-15. PubMed ID: 17902185
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Hydrogen bonding increases packing density in the protein interior.
    Schell D; Tsai J; Scholtz JM; Pace CN
    Proteins; 2006 May; 63(2):278-82. PubMed ID: 16353166
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Consensus prediction of amyloidogenic determinants in amyloid fibril-forming proteins.
    Hamodrakas SJ; Liappa C; Iconomidou VA
    Int J Biol Macromol; 2007 Aug; 41(3):295-300. PubMed ID: 17477968
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Assignment of polar states for protein amino acid residues using an interaction cluster decomposition algorithm and its application to high resolution protein structure modeling.
    Li X; Jacobson MP; Zhu K; Zhao S; Friesner RA
    Proteins; 2007 Mar; 66(4):824-37. PubMed ID: 17154422
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Dimorphic aggregation behavior of a fusion polypeptide incorporating a stable protein domain (EGFP) with an amyloidogenic sequence (retroCspA).
    Sharma S; Guptasarma P
    FEBS Lett; 2008 Jun; 582(15):2203-11. PubMed ID: 18498769
    [TBL] [Abstract][Full Text] [Related]  

  • 38. The effect of sequence on the conformational stability of a model heteropolymer in explicit water.
    Patel BA; Debenedetti PG; Stillinger FH; Rossky PJ
    J Chem Phys; 2008 May; 128(17):175102. PubMed ID: 18465941
    [TBL] [Abstract][Full Text] [Related]  

  • 39. [Systematic analysis of buried polar side chains and their interactions in alpha-helical proteins].
    Kondratova MS; Efimov AV
    Mol Biol (Mosk); 2002; 36(1):144-51. PubMed ID: 11862705
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Competition between folding, native-state dimerisation and amyloid aggregation in beta-lactoglobulin.
    Hamada D; Tanaka T; Tartaglia GG; Pawar A; Vendruscolo M; Kawamura M; Tamura A; Tanaka N; Dobson CM
    J Mol Biol; 2009 Feb; 386(3):878-90. PubMed ID: 19133274
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 6.