These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

157 related articles for article (PubMed ID: 16948156)

  • 21. Protein molecular dynamics with electrostatic force entirely determined by a single Poisson-Boltzmann calculation.
    Lu BZ; Chen WZ; Wang CX; Xu XJ
    Proteins; 2002 Aug; 48(3):497-504. PubMed ID: 12112674
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Molecular dynamics-solvated interaction energy studies of protein-protein interactions: the MP1-p14 scaffolding complex.
    Cui Q; Sulea T; Schrag JD; Munger C; Hung MN; Naïm M; Cygler M; Purisima EO
    J Mol Biol; 2008 Jun; 379(4):787-802. PubMed ID: 18479705
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Validating a strategy for molecular dynamics simulations of cyclodextrin inclusion complexes through single-crystal X-ray and NMR experimental data: a case study.
    Raffaini G; Ganazzoli F; Malpezzi L; Fuganti C; Fronza G; Panzeri W; Mele A
    J Phys Chem B; 2009 Jul; 113(27):9110-22. PubMed ID: 19526998
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Allosteric inhibition of aminoglycoside phosphotransferase by a designed ankyrin repeat protein.
    Kohl A; Amstutz P; Parizek P; Binz HK; Briand C; Capitani G; Forrer P; Plückthun A; Grütter MG
    Structure; 2005 Aug; 13(8):1131-41. PubMed ID: 16084385
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Intra-protein hydrogen bonding is dynamically stabilized by electronic polarization.
    Duan LL; Mei Y; Zhang QG; Zhang JZ
    J Chem Phys; 2009 Mar; 130(11):115102. PubMed ID: 19317568
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Incorporating receptor flexibility in the molecular design of protein interfaces.
    Li L; Liang S; Pilcher MM; Meroueh SO
    Protein Eng Des Sel; 2009 Sep; 22(9):575-86. PubMed ID: 19643976
    [TBL] [Abstract][Full Text] [Related]  

  • 27. X-ray structural and simulation analysis of a protein mutant: the value of a combined approach.
    Mattos C; Cohen JD; Green DF; Tidor B; Karplus M
    Proteins; 2004 May; 55(3):733-42. PubMed ID: 15103635
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Comparisons of the conformational stability of cyclin-dependent kinase (CDK) 4-interacting ankyrin repeat (AR) proteins.
    Guo Y; Mahajan A; Yuan C; Joo SH; Weghorst CM; Tsai MD; Li J
    Biochemistry; 2009 May; 48(19):4050-62. PubMed ID: 19320462
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Independent movement, dimerization and stability of tandem repeats of chicken brain alpha-spectrin.
    Kusunoki H; Minasov G; Macdonald RI; Mondragón A
    J Mol Biol; 2004 Nov; 344(2):495-511. PubMed ID: 15522301
    [TBL] [Abstract][Full Text] [Related]  

  • 30. DARPin-assisted crystallography of the CC2-LZ domain of NEMO reveals a coupling between dimerization and ubiquitin binding.
    Grubisha O; Kaminska M; Duquerroy S; Fontan E; Cordier F; Haouz A; Raynal B; Chiaravalli J; Delepierre M; Israël A; Véron M; Agou F
    J Mol Biol; 2010 Jan; 395(1):89-104. PubMed ID: 19854204
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Molecular dynamics simulations of the native and partially folded states of ubiquitin: influence of methanol cosolvent, pH, and temperature on the protein structure and dynamics.
    Kony DB; Hünenberger PH; van Gunsteren WF
    Protein Sci; 2007 Jun; 16(6):1101-18. PubMed ID: 17525462
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Effects of environment on the structure of Pyrococcus furiosus rubredoxin: a molecular dynamics study.
    Ergenekan CE; Tan ML; Ichiye T
    Proteins; 2005 Dec; 61(4):823-8. PubMed ID: 16245319
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Implementation and testing of stable, fast implicit solvation in molecular dynamics using the smooth-permittivity finite difference Poisson-Boltzmann method.
    Prabhu NV; Zhu P; Sharp KA
    J Comput Chem; 2004 Dec; 25(16):2049-64. PubMed ID: 15481091
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Structure and dynamics of a predicted ferredoxin-like selenoprotein in Japanese encephalitis virus.
    Zhong H; Taylor EW
    J Mol Graph Model; 2004 Dec; 23(3):223-31. PubMed ID: 15530818
    [TBL] [Abstract][Full Text] [Related]  

  • 35. A designed ankyrin repeat protein evolved to picomolar affinity to Her2.
    Zahnd C; Wyler E; Schwenk JM; Steiner D; Lawrence MC; McKern NM; Pecorari F; Ward CW; Joos TO; Plückthun A
    J Mol Biol; 2007 Jun; 369(4):1015-28. PubMed ID: 17466328
    [TBL] [Abstract][Full Text] [Related]  

  • 36. NMR study and molecular dynamics simulations of optimized beta-hairpin fragments of protein G.
    Wei Y; Huyghues-Despointes BM; Tsai J; Scholtz JM
    Proteins; 2007 Nov; 69(2):285-96. PubMed ID: 17600831
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Identification of amino acid residues of a designed ankyrin repeat protein potentially involved in intermolecular interactions with CD4: analysis by molecular dynamics simulations.
    Nimmanpipug P; Khampa C; Lee VS; Nangola S; Tayapiwatana C
    J Mol Graph Model; 2011 Nov; 31():65-75. PubMed ID: 21962990
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Theoretical calculation of the coiled-coil stability in water in the context of its possible use as a molecular rack.
    Orzechowski M; Cieplak P; Piela L
    J Comput Chem; 2002 Jan; 23(1):106-10. PubMed ID: 11913375
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Relative stability of protein structures determined by X-ray crystallography or NMR spectroscopy: a molecular dynamics simulation study.
    Fan H; Mark AE
    Proteins; 2003 Oct; 53(1):111-20. PubMed ID: 12945054
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Protein-protein docking by simulating the process of association subject to biochemical constraints.
    Motiejunas D; Gabdoulline R; Wang T; Feldman-Salit A; Johann T; Winn PJ; Wade RC
    Proteins; 2008 Jun; 71(4):1955-69. PubMed ID: 18186463
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 8.