These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

515 related articles for article (PubMed ID: 16948844)

  • 1. PhyloPat: phylogenetic pattern analysis of eukaryotic genes.
    Hulsen T; de Vlieg J; Groenen PM
    BMC Bioinformatics; 2006 Sep; 7():398. PubMed ID: 16948844
    [TBL] [Abstract][Full Text] [Related]  

  • 2. PhyloPat: an updated version of the phylogenetic pattern database contains gene neighborhood.
    Hulsen T; Groenen PM; de Vlieg J; Alkema W
    Nucleic Acids Res; 2009 Jan; 37(Database issue):D731-7. PubMed ID: 18832367
    [TBL] [Abstract][Full Text] [Related]  

  • 3. OrthologID: automation of genome-scale ortholog identification within a parsimony framework.
    Chiu JC; Lee EK; Egan MG; Sarkar IN; Coruzzi GM; DeSalle R
    Bioinformatics; 2006 Mar; 22(6):699-707. PubMed ID: 16410324
    [TBL] [Abstract][Full Text] [Related]  

  • 4. GeneTools--application for functional annotation and statistical hypothesis testing.
    Beisvag V; Jünge FK; Bergum H; Jølsum L; Lydersen S; Günther CC; Ramampiaro H; Langaas M; Sandvik AK; Laegreid A
    BMC Bioinformatics; 2006 Oct; 7():470. PubMed ID: 17062145
    [TBL] [Abstract][Full Text] [Related]  

  • 5. PhyloGena--a user-friendly system for automated phylogenetic annotation of unknown sequences.
    Hanekamp K; Bohnebeck U; Beszteri B; Valentin K
    Bioinformatics; 2007 Apr; 23(7):793-801. PubMed ID: 17332025
    [TBL] [Abstract][Full Text] [Related]  

  • 6. MANTIS: a phylogenetic framework for multi-species genome comparisons.
    Tzika AC; Helaers R; Van de Peer Y; Milinkovitch MC
    Bioinformatics; 2008 Jan; 24(2):151-7. PubMed ID: 18025004
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Nested Containment List (NCList): a new algorithm for accelerating interval query of genome alignment and interval databases.
    Alekseyenko AV; Lee CJ
    Bioinformatics; 2007 Jun; 23(11):1386-93. PubMed ID: 17234640
    [TBL] [Abstract][Full Text] [Related]  

  • 8. GenomeBlast: a web tool for small genome comparison.
    Lu G; Jiang L; Helikar RM; Rowley TW; Zhang L; Chen X; Moriyama EN
    BMC Bioinformatics; 2006 Dec; 7 Suppl 4(Suppl 4):S18. PubMed ID: 17217510
    [TBL] [Abstract][Full Text] [Related]  

  • 9. ESTuber db: an online database for Tuber borchii EST sequences.
    Lazzari B; Caprera A; Cosentino C; Stella A; Milanesi L; Viotti A
    BMC Bioinformatics; 2007 Mar; 8 Suppl 1(Suppl 1):S13. PubMed ID: 17430557
    [TBL] [Abstract][Full Text] [Related]  

  • 10. CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomes.
    Parra G; Bradnam K; Korf I
    Bioinformatics; 2007 May; 23(9):1061-7. PubMed ID: 17332020
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Advances in the Exon-Intron Database (EID).
    Shepelev V; Fedorov A
    Brief Bioinform; 2006 Jun; 7(2):178-85. PubMed ID: 16772261
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Automatic clustering of orthologs and inparalogs shared by multiple proteomes.
    Alexeyenko A; Tamas I; Liu G; Sonnhammer EL
    Bioinformatics; 2006 Jul; 22(14):e9-15. PubMed ID: 16873526
    [TBL] [Abstract][Full Text] [Related]  

  • 13. A database of phylogenetically atypical genes in archaeal and bacterial genomes, identified using the DarkHorse algorithm.
    Podell S; Gaasterland T; Allen EE
    BMC Bioinformatics; 2008 Oct; 9():419. PubMed ID: 18840280
    [TBL] [Abstract][Full Text] [Related]  

  • 14. TF Target Mapper: a BLAST search tool for the identification of Transcription Factor target genes.
    Horsman S; Moorhouse MJ; de Jager VC; van der Spek P; Grosveld F; Strouboulis J; Katsantoni EZ
    BMC Bioinformatics; 2006 Mar; 7():120. PubMed ID: 16524462
    [TBL] [Abstract][Full Text] [Related]  

  • 15. A novel feature-based method for whole genome phylogenetic analysis without alignment: application to HEV genotyping and subtyping.
    Liu Z; Meng J; Sun X
    Biochem Biophys Res Commun; 2008 Apr; 368(2):223-30. PubMed ID: 18230342
    [TBL] [Abstract][Full Text] [Related]  

  • 16. PLATCOM: a Platform for Computational Comparative Genomics.
    Choi K; Ma Y; Choi JH; Kim S
    Bioinformatics; 2005 May; 21(10):2514-6. PubMed ID: 15731206
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Simulating association studies: a data-based resampling method for candidate regions or whole genome scans.
    Wright FA; Huang H; Guan X; Gamiel K; Jeffries C; Barry WT; de Villena FP; Sullivan PF; Wilhelmsen KC; Zou F
    Bioinformatics; 2007 Oct; 23(19):2581-8. PubMed ID: 17785348
    [TBL] [Abstract][Full Text] [Related]  

  • 18. WindowMasker: window-based masker for sequenced genomes.
    Morgulis A; Gertz EM; Schäffer AA; Agarwala R
    Bioinformatics; 2006 Jan; 22(2):134-41. PubMed ID: 16287941
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Representation in stochastic search for phylogenetic tree reconstruction.
    Weber G; Ohno-Machado L; Shieber S
    J Biomed Inform; 2006 Feb; 39(1):43-50. PubMed ID: 16359929
    [TBL] [Abstract][Full Text] [Related]  

  • 20. LS-SNP: large-scale annotation of coding non-synonymous SNPs based on multiple information sources.
    Karchin R; Diekhans M; Kelly L; Thomas DJ; Pieper U; Eswar N; Haussler D; Sali A
    Bioinformatics; 2005 Jun; 21(12):2814-20. PubMed ID: 15827081
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 26.