304 related articles for article (PubMed ID: 16963084)
1. Structure of Aart, a designed six-finger zinc finger peptide, bound to DNA.
Segal DJ; Crotty JW; Bhakta MS; Barbas CF; Horton NC
J Mol Biol; 2006 Oct; 363(2):405-21. PubMed ID: 16963084
[TBL] [Abstract][Full Text] [Related]
2. Selected peptide extension contacts hydrophobic patch on neighboring zinc finger and mediates dimerization on DNA.
Wang BS; Grant RA; Pabo CO
Nat Struct Biol; 2001 Jul; 8(7):589-93. PubMed ID: 11427887
[TBL] [Abstract][Full Text] [Related]
3. Solution structure of the first three zinc fingers of TFIIIA bound to the cognate DNA sequence: determinants of affinity and sequence specificity.
Wuttke DS; Foster MP; Case DA; Gottesfeld JM; Wright PE
J Mol Biol; 1997 Oct; 273(1):183-206. PubMed ID: 9367756
[TBL] [Abstract][Full Text] [Related]
4. Insights into the molecular recognition of the 5'-GNN-3' family of DNA sequences by zinc finger domains.
Dreier B; Segal DJ; Barbas CF
J Mol Biol; 2000 Nov; 303(4):489-502. PubMed ID: 11054286
[TBL] [Abstract][Full Text] [Related]
5. DNA-induced alpha-helix capping in conserved linker sequences is a determinant of binding affinity in Cys(2)-His(2) zinc fingers.
Laity JH; Dyson HJ; Wright PE
J Mol Biol; 2000 Jan; 295(4):719-27. PubMed ID: 10656784
[TBL] [Abstract][Full Text] [Related]
6. Rearrangement of side-chains in a Zif268 mutant highlights the complexities of zinc finger-DNA recognition.
Miller JC; Pabo CO
J Mol Biol; 2001 Oct; 313(2):309-15. PubMed ID: 11800559
[TBL] [Abstract][Full Text] [Related]
7. Serine at position 2 in the DNA recognition helix of a Cys2-His2 zinc finger peptide is not, in general, responsible for base recognition.
Kim CA; Berg JM
J Mol Biol; 1995 Sep; 252(1):1-5. PubMed ID: 7666422
[TBL] [Abstract][Full Text] [Related]
8. Characterization of the DNA binding activity of the ZFY zinc finger domain.
Grants J; Flanagan E; Yee A; Romaniuk PJ
Biochemistry; 2010 Feb; 49(4):679-86. PubMed ID: 20028140
[TBL] [Abstract][Full Text] [Related]
9. The crystal structure of a two zinc-finger peptide reveals an extension to the rules for zinc-finger/DNA recognition.
Fairall L; Schwabe JW; Chapman L; Finch JT; Rhodes D
Nature; 1993 Dec; 366(6454):483-7. PubMed ID: 8247159
[TBL] [Abstract][Full Text] [Related]
10. Base sequence discrimination by zinc-finger DNA-binding domains.
Nardelli J; Gibson TJ; Vesque C; Charnay P
Nature; 1991 Jan; 349(6305):175-8. PubMed ID: 1898772
[TBL] [Abstract][Full Text] [Related]
11. Artificial nine zinc-finger peptide with 30 base pair binding sites.
Kamiuchi T; Abe E; Imanishi M; Kaji T; Nagaoka M; Sugiura Y
Biochemistry; 1998 Sep; 37(39):13827-34. PubMed ID: 9753472
[TBL] [Abstract][Full Text] [Related]
12. Alpha-helical linker of an artificial 6-zinc finger peptide contributes to selective DNA binding to a discontinuous recognition sequence.
Yan W; Imanishi M; Futaki S; Sugiura Y
Biochemistry; 2007 Jul; 46(29):8517-24. PubMed ID: 17602503
[TBL] [Abstract][Full Text] [Related]
13. Structure of a designed dimeric zinc finger protein bound to DNA.
Wolfe SA; Grant RA; Pabo CO
Biochemistry; 2003 Nov; 42(46):13401-9. PubMed ID: 14621985
[TBL] [Abstract][Full Text] [Related]
14. Exchange of histidine spacing between Sp1 and GLI zinc fingers: distinct effect of histidine spacing-linker region on DNA binding.
Shiraishi Y; Imanishi M; Sugiura Y
Biochemistry; 2004 May; 43(20):6352-9. PubMed ID: 15147220
[TBL] [Abstract][Full Text] [Related]
15. DNA unwinding induced by zinc finger protein binding.
Shi Y; Berg JM
Biochemistry; 1996 Mar; 35(12):3845-8. PubMed ID: 8620008
[TBL] [Abstract][Full Text] [Related]
16. Crystal structure of a zinc-finger-RNA complex reveals two modes of molecular recognition.
Lu D; Searles MA; Klug A
Nature; 2003 Nov; 426(6962):96-100. PubMed ID: 14603324
[TBL] [Abstract][Full Text] [Related]
17. Cooperativity and specificity of Cys2His2 zinc finger protein-DNA interactions: a molecular dynamics simulation study.
Lee J; Kim JS; Seok C
J Phys Chem B; 2010 Jun; 114(22):7662-71. PubMed ID: 20469897
[TBL] [Abstract][Full Text] [Related]
18. Different contributions of three zinc fingers of transcription factor Sp1 to DNA recognition: novel binding mode of N-terminal finger 1.
Saegusa N; Yokono M; Matsushita K; Sugiura Y
Nucleic Acids Symp Ser; 1997; (37):151-2. PubMed ID: 9586044
[TBL] [Abstract][Full Text] [Related]
19. Evaluation of a modular strategy for the construction of novel polydactyl zinc finger DNA-binding proteins.
Segal DJ; Beerli RR; Blancafort P; Dreier B; Effertz K; Huber A; Koksch B; Lund CV; Magnenat L; Valente D; Barbas CF
Biochemistry; 2003 Feb; 42(7):2137-48. PubMed ID: 12590603
[TBL] [Abstract][Full Text] [Related]
20. Keep your fingers off my DNA: protein-protein interactions mediated by C2H2 zinc finger domains.
Brayer KJ; Segal DJ
Cell Biochem Biophys; 2008; 50(3):111-31. PubMed ID: 18253864
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
