These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
2. Monte Carlo simulations of supercoiling free energies for unknotted and trefoil knotted DNAs. Gebe JA; Allison SA; Clendenning JB; Schurr JM Biophys J; 1995 Feb; 68(2):619-33. PubMed ID: 7696514 [TBL] [Abstract][Full Text] [Related]
3. Monte Carlo simulations of supercoiled DNAs confined to a plane. Fujimoto BS; Schurr JM Biophys J; 2002 Feb; 82(2):944-62. PubMed ID: 11806935 [TBL] [Abstract][Full Text] [Related]
4. On the origin of the temperature dependence of the supercoiling free energy. Delrow JJ; Heath PJ; Schurr JM Biophys J; 1997 Nov; 73(5):2688-701. PubMed ID: 9370462 [TBL] [Abstract][Full Text] [Related]
5. Monte Carlo simulations of locally melted supercoiled DNAs in 20 mM ionic strength. Sucato CA; Rangel DP; Aspleaf D; Fujimoto BS; Schurr JM Biophys J; 2004 May; 86(5):3079-96. PubMed ID: 15111422 [TBL] [Abstract][Full Text] [Related]
6. Interaction of chloroquine with linear and supercoiled DNAs. Effect on the torsional dynamics, rigidity, and twist energy parameter. Wu PG; Song L; Clendenning JB; Fujimoto BS; Benight AS; Schurr JM Biochemistry; 1988 Oct; 27(21):8128-44. PubMed ID: 3233199 [TBL] [Abstract][Full Text] [Related]
7. Effects of Na+ and Mg2+ on the structures of supercoiled DNAs: comparison of simulations with experiments. Gebe JA; Delrow JJ; Heath PJ; Fujimoto BS; Stewart DW; Schurr JM J Mol Biol; 1996 Sep; 262(2):105-28. PubMed ID: 8831783 [TBL] [Abstract][Full Text] [Related]
8. Effect of anisotropy of the bending rigidity on the supercoiling free energy of small circular DNAs. Schurr JM; Babcock HP; Gebe JA Biopolymers; 1995 Nov; 36(5):633-41. PubMed ID: 7578955 [TBL] [Abstract][Full Text] [Related]
9. Effect of ethidium on the torsion constants of linear and supercoiled DNAs. Wu PG; Fujimoto BS; Song L; Schurr JM Biophys Chem; 1991 Dec; 41(3):217-36. PubMed ID: 1777574 [TBL] [Abstract][Full Text] [Related]
10. Thermodynamics of the first transition in writhe of a small circular DNA by Monte Carlo simulation. Gebe JA; Schurr JM Biopolymers; 1996 Apr; 38(4):493-503. PubMed ID: 8867211 [TBL] [Abstract][Full Text] [Related]
11. The free energy of DNA supercoiling is enthalpy-determined. Seidl A; Hinz HJ Proc Natl Acad Sci U S A; 1984 Mar; 81(5):1312-6. PubMed ID: 6369324 [TBL] [Abstract][Full Text] [Related]
12. Effects of chloroquine on the torsional dynamics and rigidities of linear and supercoiled DNAs at low ionic strength. Wu P; Schurr JM Biopolymers; 1989 Oct; 28(10):1695-703. PubMed ID: 2597725 [TBL] [Abstract][Full Text] [Related]
13. A possible cooperative structural transition of DNA in the 0.25-2.0 pN range. Schurr JM J Phys Chem B; 2015 May; 119(21):6389-400. PubMed ID: 25938882 [TBL] [Abstract][Full Text] [Related]
14. Supercoiled pseudocircular domains in single-twisted DNAs under tension: Elastic constants and unwinding dynamics in complexes with Topo I. Schurr JM; Fujimoto BS Biopolymers; 2013 Dec; 99(12):1046-69. PubMed ID: 23640759 [TBL] [Abstract][Full Text] [Related]
15. Torsional rigidity of positively and negatively supercoiled DNA. Selvin PR; Cook DN; Pon NG; Bauer WR; Klein MP; Hearst JE Science; 1992 Jan; 255(5040):82-5. PubMed ID: 1553534 [TBL] [Abstract][Full Text] [Related]
16. Conformational and thermodynamic properties of supercoiled DNA. Vologodskii AV; Levene SD; Klenin KV; Frank-Kamenetskii M; Cozzarelli NR J Mol Biol; 1992 Oct; 227(4):1224-43. PubMed ID: 1433295 [TBL] [Abstract][Full Text] [Related]
17. The influence of salt on the structure and energetics of supercoiled DNA. Schlick T; Li B; Olson WK Biophys J; 1994 Dec; 67(6):2146-66. PubMed ID: 7696459 [TBL] [Abstract][Full Text] [Related]
18. Effect of ethidium binding and superhelix density on the supercoiling free energy and torsion and bending constants of p30 delta DNA. Clendenning JB; Naimushin AN; Fujimoto BS; Stewart DW; Schurr JM Biophys Chem; 1994 Nov; 52(3):191-218. PubMed ID: 7999972 [TBL] [Abstract][Full Text] [Related]
20. Free Energy Landscape and Dynamics of Supercoiled DNA by High-Speed Atomic Force Microscopy. Brouns T; De Keersmaecker H; Konrad SF; Kodera N; Ando T; Lipfert J; De Feyter S; Vanderlinden W ACS Nano; 2018 Dec; 12(12):11907-11916. PubMed ID: 30346700 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]