BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

130 related articles for article (PubMed ID: 16979630)

  • 1. Protein-based phylogenetic analysis by using hydropathy profile of amino acids.
    Liu N; Wang T
    FEBS Lett; 2006 Oct; 580(22):5321-7. PubMed ID: 16979630
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Hydropathy analysis to correlate structure and function of proteins.
    Damodharan L; Pattabhi V
    Biochem Biophys Res Commun; 2004 Oct; 323(3):996-1002. PubMed ID: 15381098
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Protein map: an alignment-free sequence comparison method based on various properties of amino acids.
    Yu C; Cheng SY; He RL; Yau SS
    Gene; 2011 Oct; 486(1-2):110-8. PubMed ID: 21803133
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Phylogenetic and structural analysis of mitochondrial complex I proteins.
    Liò P
    Gene; 2005 Jan; 345(1):55-64. PubMed ID: 15716089
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Predicting functionally important residues from sequence conservation.
    Capra JA; Singh M
    Bioinformatics; 2007 Aug; 23(15):1875-82. PubMed ID: 17519246
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Potential implications of availability of short amino acid sequences in proteins: an old and new approach to protein decoding and design.
    Otaki JM; Gotoh T; Yamamoto H
    Biotechnol Annu Rev; 2008; 14():109-41. PubMed ID: 18606361
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Phylogenetic analysis of DNA sequences based on the generalized pseudo-amino acid composition.
    Huang Y; Yang L; Wang T
    J Theor Biol; 2011 Jan; 269(1):217-23. PubMed ID: 21040733
    [TBL] [Abstract][Full Text] [Related]  

  • 8. COPid: composition based protein identification.
    Kumar M; Thakur V; Raghava GP
    In Silico Biol; 2008; 8(2):121-8. PubMed ID: 18928200
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Predicting protein disorder by analyzing amino acid sequence.
    Yang JY; Yang MQ
    BMC Genomics; 2008 Sep; 9 Suppl 2(Suppl 2):S8. PubMed ID: 18831799
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Correlated substitution analysis and the prediction of amino acid structural contacts.
    Horner DS; Pirovano W; Pesole G
    Brief Bioinform; 2008 Jan; 9(1):46-56. PubMed ID: 18000015
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Effective connectivity profile: a structural representation that evidences the relationship between protein structures and sequences.
    Bastolla U; Ortíz AR; Porto M; Teichert F
    Proteins; 2008 Dec; 73(4):872-88. PubMed ID: 18536008
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Support Vector Machine-based classification of protein folds using the structural properties of amino acid residues and amino acid residue pairs.
    Shamim MT; Anwaruddin M; Nagarajaram HA
    Bioinformatics; 2007 Dec; 23(24):3320-7. PubMed ID: 17989092
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Prediction of protein structural classes by Chou's pseudo amino acid composition: approached using continuous wavelet transform and principal component analysis.
    Li ZC; Zhou XB; Dai Z; Zou XY
    Amino Acids; 2009 Jul; 37(2):415-25. PubMed ID: 18726140
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Periodic distributions of hydrophobic amino acids allows the definition of fundamental building blocks to align distantly related proteins.
    Baussand J; Deremble C; Carbone A
    Proteins; 2007 May; 67(3):695-708. PubMed ID: 17299747
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Analysis of similarity/dissimilarity of protein sequences.
    Yao YH; Dai Q; Li C; He PA; Nan XY; Zhang YZ
    Proteins; 2008 Dec; 73(4):864-71. PubMed ID: 18536018
    [TBL] [Abstract][Full Text] [Related]  

  • 16. A machine learning based method for the prediction of secretory proteins using amino acid composition, their order and similarity-search.
    Garg A; Raghava GP
    In Silico Biol; 2008; 8(2):129-40. PubMed ID: 18928201
    [TBL] [Abstract][Full Text] [Related]  

  • 17. BiasViz: visualization of amino acid biased regions in protein alignments.
    Huska MR; Buschmann H; Andrade-Navarro MA
    Bioinformatics; 2007 Nov; 23(22):3093-4. PubMed ID: 17921493
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Novel numerical characterization of protein sequences based on individual amino acid and its application.
    Zhang YP; Sheng YJ; Zheng W; He PA; Ruan JS
    Biomed Res Int; 2015; 2015():909567. PubMed ID: 25705698
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Investigation of surface properties of amino acids: polarity scale for amino acids as a means to predict surface exposed residues in films of proteins.
    Maheshwari R; Dhathathreyan A
    J Colloid Interface Sci; 2004 Sep; 277(1):79-83. PubMed ID: 15276041
    [TBL] [Abstract][Full Text] [Related]  

  • 20. The SAAPdb web resource: a large-scale structural analysis of mutant proteins.
    Hurst JM; McMillan LE; Porter CT; Allen J; Fakorede A; Martin AC
    Hum Mutat; 2009 Apr; 30(4):616-24. PubMed ID: 19191322
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.