122 related articles for article (PubMed ID: 17048389)
1. Jointly analyzing gene expression and copy number data in breast cancer using data reduction models.
Berger JA; Hautaniemi S; Mitra SK; Astola J
IEEE/ACM Trans Comput Biol Bioinform; 2006; 3(1):2-16. PubMed ID: 17048389
[TBL] [Abstract][Full Text] [Related]
2. Integrated analysis of gene expression and copy number data on gene shaving using independent component analysis.
Sheng J; Deng HW; Calhoun VD; Wang YP
IEEE/ACM Trans Comput Biol Bioinform; 2011; 8(6):1568-79. PubMed ID: 21519112
[TBL] [Abstract][Full Text] [Related]
3. A network-based approach to identify disease-associated gene modules through integrating DNA methylation and gene expression.
Zhang Y; Zhang J; Liu Z; Liu Y; Tuo S
Biochem Biophys Res Commun; 2015 Sep; 465(3):437-42. PubMed ID: 26282201
[TBL] [Abstract][Full Text] [Related]
4. Integration of gene expression and gene copy number variations with independent component analysis.
Wang YP
Annu Int Conf IEEE Eng Med Biol Soc; 2008; 2008():5700-3. PubMed ID: 19164011
[TBL] [Abstract][Full Text] [Related]
5. Large scale data mining approach for gene-specific standardization of microarray gene expression data.
Yoon S; Yang Y; Choi J; Seong J
Bioinformatics; 2006 Dec; 22(23):2898-904. PubMed ID: 17032674
[TBL] [Abstract][Full Text] [Related]
6. Distinct patterns of DNA copy number alteration are associated with different clinicopathological features and gene-expression subtypes of breast cancer.
Bergamaschi A; Kim YH; Wang P; Sørlie T; Hernandez-Boussard T; Lonning PE; Tibshirani R; Børresen-Dale AL; Pollack JR
Genes Chromosomes Cancer; 2006 Nov; 45(11):1033-40. PubMed ID: 16897746
[TBL] [Abstract][Full Text] [Related]
7. A double-layered mixture model for the joint analysis of DNA copy number and gene expression data.
Choi H; Qin ZS; Ghosh D
J Comput Biol; 2010 Feb; 17(2):121-37. PubMed ID: 20170400
[TBL] [Abstract][Full Text] [Related]
8. Coupled two-way clustering analysis of breast cancer and colon cancer gene expression data.
Getz G; Gal H; Kela I; Notterman DA; Domany E
Bioinformatics; 2003 Jun; 19(9):1079-89. PubMed ID: 12801868
[TBL] [Abstract][Full Text] [Related]
9. Gene-resolution analysis of DNA copy number variation using oligonucleotide expression microarrays.
Auer H; Newsom DL; Nowak NJ; McHugh KM; Singh S; Yu CY; Yang Y; Wenger GD; Gastier-Foster JM; Kornacker K
BMC Genomics; 2007 Apr; 8():111. PubMed ID: 17470268
[TBL] [Abstract][Full Text] [Related]
10. Mixture classification model based on clinical markers for breast cancer prognosis.
Zeng T; Liu J
Artif Intell Med; 2010; 48(2-3):129-37. PubMed ID: 20005686
[TBL] [Abstract][Full Text] [Related]
11. Identification of Gene Expression Pattern Related to Breast Cancer Survival Using Integrated TCGA Datasets and Genomic Tools.
Huang Z; Duan H; Li H
Biomed Res Int; 2015; 2015():878546. PubMed ID: 26576432
[TBL] [Abstract][Full Text] [Related]
12. Deciphering the Correlation between Breast Tumor Samples and Cell Lines by Integrating Copy Number Changes and Gene Expression Profiles.
Sun Y; Liu Q
Biomed Res Int; 2015; 2015():901303. PubMed ID: 26273658
[TBL] [Abstract][Full Text] [Related]
13. Identification of aberrant chromosomal regions from gene expression microarray studies applied to human breast cancer.
Buness A; Kuner R; Ruschhaupt M; Poustka A; Sültmann H; Tresch A
Bioinformatics; 2007 Sep; 23(17):2273-80. PubMed ID: 17599933
[TBL] [Abstract][Full Text] [Related]
14. Targets of genome copy number reduction in primary breast cancers identified by integrative genomics.
Chen W; Salto-Tellez M; Palanisamy N; Ganesan K; Hou Q; Tan LK; Sii LH; Ito K; Tan B; Wu J; Tay A; Tan KC; Ang E; Tan BK; Tan PH; Ito Y; Tan P
Genes Chromosomes Cancer; 2007 Mar; 46(3):288-301. PubMed ID: 17171680
[TBL] [Abstract][Full Text] [Related]
15. Comprehensive annotation of bidirectional promoters identifies co-regulation among breast and ovarian cancer genes.
Yang MQ; Koehly LM; Elnitski LL
PLoS Comput Biol; 2007 Apr; 3(4):e72. PubMed ID: 17447839
[TBL] [Abstract][Full Text] [Related]
16. Comparative gene marker selection suite.
Gould J; Getz G; Monti S; Reich M; Mesirov JP
Bioinformatics; 2006 Aug; 22(15):1924-5. PubMed ID: 16709585
[TBL] [Abstract][Full Text] [Related]
17. Stable Gene Signature Selection for Prediction of Breast Cancer Recurrence Using Joint Mutual Information.
Sehhati M; Mehridehnavi A; Rabbani H; Pourhossein M
IEEE/ACM Trans Comput Biol Bioinform; 2015; 12(6):1440-8. PubMed ID: 26671813
[TBL] [Abstract][Full Text] [Related]
18. Disease-specific genomic analysis: identifying the signature of pathologic biology.
Nicolau M; Tibshirani R; Børresen-Dale AL; Jeffrey SS
Bioinformatics; 2007 Apr; 23(8):957-65. PubMed ID: 17277331
[TBL] [Abstract][Full Text] [Related]
19. DNA copy number alterations and expression of relevant genes in triple-negative breast cancer.
Han W; Jung EM; Cho J; Lee JW; Hwang KT; Yang SJ; Kang JJ; Bae JY; Jeon YK; Park IA; Nicolau M; Jeffrey SS; Noh DY
Genes Chromosomes Cancer; 2008 Jun; 47(6):490-9. PubMed ID: 18314908
[TBL] [Abstract][Full Text] [Related]
20. Weighted clustering of called array CGH data.
Van Wieringen WN; Van De Wiel MA; Ylstra B
Biostatistics; 2008 Jul; 9(3):484-500. PubMed ID: 18156651
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]