These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

374 related articles for article (PubMed ID: 17064170)

  • 1. Folding transition-state and denatured-state ensembles of FSD-1 from folding and unfolding simulations.
    Lei H; Dastidar SG; Duan Y
    J Phys Chem B; 2006 Nov; 110(43):22001-8. PubMed ID: 17064170
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Probing the energy landscape of protein folding/unfolding transition states.
    De Jong D; Riley R; Alonso DO; Daggett V
    J Mol Biol; 2002 May; 319(1):229-42. PubMed ID: 12051948
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Kinetic analysis of molecular dynamics simulations reveals changes in the denatured state and switch of folding pathways upon single-point mutation of a beta-sheet miniprotein.
    Muff S; Caflisch A
    Proteins; 2008 Mar; 70(4):1185-95. PubMed ID: 17847092
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Towards a complete description of the structural and dynamic properties of the denatured state of barnase and the role of residual structure in folding.
    Wong KB; Clarke J; Bond CJ; Neira JL; Freund SM; Fersht AR; Daggett V
    J Mol Biol; 2000 Mar; 296(5):1257-82. PubMed ID: 10698632
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Thermal unfolding simulations of a multimeric protein--transition state and unfolding pathways.
    Duan J; Nilsson L
    Proteins; 2005 May; 59(2):170-82. PubMed ID: 15723359
    [TBL] [Abstract][Full Text] [Related]  

  • 6. On the origins of the weak folding cooperativity of a designed ββα ultrafast protein FSD-1.
    Wu C; Shea JE
    PLoS Comput Biol; 2010 Nov; 6(11):e1000998. PubMed ID: 21124953
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Understanding the folding and stability of a zinc finger-based full sequence design protein with replica exchange molecular dynamics simulations.
    Li W; Zhang J; Wang W
    Proteins; 2007 May; 67(2):338-49. PubMed ID: 17285627
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Is protein unfolding the reverse of protein folding? A lattice simulation analysis.
    Dinner AR; Karplus M
    J Mol Biol; 1999 Sep; 292(2):403-19. PubMed ID: 10493884
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Roles of native topology and chain-length scaling in protein folding: a simulation study with a Go-like model.
    Koga N; Takada S
    J Mol Biol; 2001 Oct; 313(1):171-80. PubMed ID: 11601854
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Folding models of mini-protein FSD-1.
    Lee IH; Kim SY; Lee J
    J Phys Chem B; 2012 Jun; 116(23):6916-22. PubMed ID: 22417236
    [TBL] [Abstract][Full Text] [Related]  

  • 11. The folding pathway of ubiquitin from all-atom molecular dynamics simulations.
    Marianayagam NJ; Jackson SE
    Biophys Chem; 2004 Oct; 111(2):159-71. PubMed ID: 15381313
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Transition state contact orders correlate with protein folding rates.
    Paci E; Lindorff-Larsen K; Dobson CM; Karplus M; Vendruscolo M
    J Mol Biol; 2005 Sep; 352(3):495-500. PubMed ID: 16120445
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Perturbations of the denatured state ensemble: modeling their effects on protein stability and folding kinetics.
    Wrabl JO; Shortle D
    Protein Sci; 1996 Nov; 5(11):2343-52. PubMed ID: 8931153
    [TBL] [Abstract][Full Text] [Related]  

  • 14. The nature of the free energy barriers to two-state folding.
    Akmal A; Muñoz V
    Proteins; 2004 Oct; 57(1):142-52. PubMed ID: 15326600
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Denatured-state ensemble and the early-stage folding of the G29A mutant of the B-domain of protein A.
    Chowdhury S; Lei H; Duan Y
    J Phys Chem B; 2005 May; 109(18):9073-81. PubMed ID: 16852080
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Mapping the interactions present in the transition state for unfolding/folding of FKBP12.
    Fulton KF; Main ER; Daggett V; Jackson SE
    J Mol Biol; 1999 Aug; 291(2):445-61. PubMed ID: 10438631
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Statistical mechanics of protein folding, unfolding and fluctuation.
    Gło N
    Adv Biophys; 1976; ():65-113. PubMed ID: 1015397
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Towards a consistent modeling of protein thermodynamic and kinetic cooperativity: how applicable is the transition state picture to folding and unfolding?
    Kaya H; Chan HS
    J Mol Biol; 2002 Jan; 315(4):899-909. PubMed ID: 11812156
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Exploring the minimally frustrated energy landscape of unfolded ACBP.
    Ozenne V; Noel JK; Heidarsson PO; Brander S; Poulsen FM; Jensen MR; Kragelund BB; Blackledge M; Danielsson J
    J Mol Biol; 2014 Feb; 426(3):722-34. PubMed ID: 24211721
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Identification and characterization of the unfolding transition state of chymotrypsin inhibitor 2 by molecular dynamics simulations.
    Li A; Daggett V
    J Mol Biol; 1996 Mar; 257(2):412-29. PubMed ID: 8609633
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 19.