BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

320 related articles for article (PubMed ID: 17109755)

  • 1. A comparative analysis of the information content in long and short SAGE libraries.
    Li YJ; Xu P; Qin X; Schmechel DE; Hulette CM; Haines JL; Pericak-Vance MA; Gilbert JR
    BMC Bioinformatics; 2006 Nov; 7():504. PubMed ID: 17109755
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Statistical modeling of sequencing errors in SAGE libraries.
    Beissbarth T; Hyde L; Smyth GK; Job C; Boon WM; Tan SS; Scott HS; Speed TP
    Bioinformatics; 2004 Aug; 20 Suppl 1():i31-9. PubMed ID: 15262778
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Identitag, a relational database for SAGE tag identification and interspecies comparison of SAGE libraries.
    Keime C; Damiola F; Mouchiroud D; Duret L; Gandrillon O
    BMC Bioinformatics; 2004 Oct; 5():143. PubMed ID: 15469608
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Deep analysis of cellular transcriptomes - LongSAGE versus classic MPSS.
    Hene L; Sreenu VB; Vuong MT; Abidi SH; Sutton JK; Rowland-Jones SL; Davis SJ; Evans EJ
    BMC Genomics; 2007 Sep; 8():333. PubMed ID: 17892551
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Annotating nonspecific SAGE tags with microarray data.
    Ge X; Jung YC; Wu Q; Kibbe WA; Wang SM
    Genomics; 2006 Jan; 87(1):173-80. PubMed ID: 16314072
    [TBL] [Abstract][Full Text] [Related]  

  • 6. [Transcriptomes for serial analysis of gene expression].
    Marti J; Piquemal D; Manchon L; Commes T
    J Soc Biol; 2002; 196(4):303-7. PubMed ID: 12645300
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Computational Analysis of Gene Identification with SAGE.
    Clark T; Lee S; Ridgway Scott L; Wang SM
    J Comput Biol; 2002; 9(3):513-26. PubMed ID: 12162890
    [TBL] [Abstract][Full Text] [Related]  

  • 8. A comparative molecular analysis of developing mouse forelimbs and hindlimbs using serial analysis of gene expression (SAGE).
    Margulies EH; Kardia SL; Innis JW
    Genome Res; 2001 Oct; 11(10):1686-98. PubMed ID: 11591645
    [TBL] [Abstract][Full Text] [Related]  

  • 9. [Validation of the libraries of the serial analysis of gene expression by the application of real-time quantitative polymerase chain reaction].
    Yin LM; Zhang QH; Wang Y; Xu YD; Yang YQ
    Zhongguo Yi Xue Ke Xue Yuan Xue Bao; 2010 Feb; 32(1):51-4. PubMed ID: 20236588
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Mining SAGE data allows large-scale, sensitive screening of antisense transcript expression.
    Quéré R; Manchon L; Lejeune M; Clément O; Pierrat F; Bonafoux B; Commes T; Piquemal D; Marti J
    Nucleic Acids Res; 2004 Nov; 32(20):e163. PubMed ID: 15561998
    [TBL] [Abstract][Full Text] [Related]  

  • 11. aRNA-longSAGE: a new approach to generate SAGE libraries from microdissected cells.
    Heidenblut AM; Lüttges J; Buchholz M; Heinitz C; Emmersen J; Nielsen KL; Schreiter P; Souquet M; Nowacki S; Herbrand U; Klöppel G; Schmiegel W; Gress T; Hahn SA
    Nucleic Acids Res; 2004 Sep; 32(16):e131. PubMed ID: 15371555
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Serial analysis of gene expression (SAGE) in normal human trabecular meshwork.
    Liu Y; Munro D; Layfield D; Dellinger A; Walter J; Peterson K; Rickman CB; Allingham RR; Hauser MA
    Mol Vis; 2011 Apr; 17():885-93. PubMed ID: 21528004
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Cloning of tissue-specific genes using serial analysis of gene expression and a novel computational substraction approach.
    Moreno JC; Pauws E; van Kampen AH; Jedlicková M; de Vijlder JJ; Ris-Stalpers C
    Genomics; 2001 Jul; 75(1-3):70-6. PubMed ID: 11472069
    [TBL] [Abstract][Full Text] [Related]  

  • 14. A large quantity of novel human antisense transcripts detected by LongSAGE.
    Ge X; Wu Q; Jung YC; Chen J; Wang SM
    Bioinformatics; 2006 Oct; 22(20):2475-9. PubMed ID: 16895931
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Robust-LongSAGE (RL-SAGE): an improved LongSAGE method for high-throughput transcriptome analysis.
    Gowda M; Wang GL
    Methods Mol Biol; 2008; 387():25-38. PubMed ID: 18287620
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Transcriptome annotation using tandem SAGE tags.
    Rivals E; Boureux A; Lejeune M; Ottones F; Pérez OP; Tarhio J; Pierrat F; Ruffle F; Commes T; Marti J
    Nucleic Acids Res; 2007; 35(17):e108. PubMed ID: 17709346
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Discarding duplicate ditags in LongSAGE analysis may introduce significant error.
    Emmersen J; Heidenblut AM; Høgh AL; Hahn SA; Welinder KG; Nielsen KL
    BMC Bioinformatics; 2007 Mar; 8():92. PubMed ID: 17359537
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Robust-LongSAGE (RL-SAGE): a substantially improved LongSAGE method for gene discovery and transcriptome analysis.
    Gowda M; Jantasuriyarat C; Dean RA; Wang GL
    Plant Physiol; 2004 Mar; 134(3):890-7. PubMed ID: 15020752
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Reverse serial analysis of gene expression (SAGE) characterization of orphan SAGE tags from human embryonic stem cells identifies the presence of novel transcripts and antisense transcription of key pluripotency genes.
    Richards M; Tan SP; Chan WK; Bongso A
    Stem Cells; 2006 May; 24(5):1162-73. PubMed ID: 16456128
    [TBL] [Abstract][Full Text] [Related]  

  • 20. LongSAGE analysis significantly improves genome annotation: identifications of novel genes and alternative transcripts in the mouse.
    Wahl MB; Heinzmann U; Imai K
    Bioinformatics; 2005 Apr; 21(8):1393-400. PubMed ID: 15591356
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 16.