337 related articles for article (PubMed ID: 17110368)
1. SAGA: a subgraph matching tool for biological graphs.
Tian Y; McEachin RC; Santos C; States DJ; Patel JM
Bioinformatics; 2007 Jan; 23(2):232-9. PubMed ID: 17110368
[TBL] [Abstract][Full Text] [Related]
2. A query language for biological networks.
Leser U
Bioinformatics; 2005 Sep; 21 Suppl 2():ii33-9. PubMed ID: 16204121
[TBL] [Abstract][Full Text] [Related]
3. PATIKAweb: a Web interface for analyzing biological pathways through advanced querying and visualization.
Dogrusoz U; Erson EZ; Giral E; Demir E; Babur O; Cetintas A; Colak R
Bioinformatics; 2006 Feb; 22(3):374-5. PubMed ID: 16287939
[TBL] [Abstract][Full Text] [Related]
4. GenoLink: a graph-based querying and browsing system for investigating the function of genes and proteins.
Durand P; Labarre L; Meil A; Divo JL; Vandenbrouck Y; Viari A; Wojcik J
BMC Bioinformatics; 2006 Jan; 7():21. PubMed ID: 16417636
[TBL] [Abstract][Full Text] [Related]
5. Dynamic visualization of coexpression in systems genetics data.
New J; Kendall W; Huang J; Chesler E
IEEE Trans Vis Comput Graph; 2008; 14(5):1081-94. PubMed ID: 18599919
[TBL] [Abstract][Full Text] [Related]
6. Cerebral: visualizing multiple experimental conditions on a graph with biological context.
Barsky A; Munzner T; Gardy J; Kincaid R
IEEE Trans Vis Comput Graph; 2008; 14(6):1253-60. PubMed ID: 18988971
[TBL] [Abstract][Full Text] [Related]
7. An efficient algorithm for detecting frequent subgraphs in biological networks.
Koyutürk M; Grama A; Szpankowski W
Bioinformatics; 2004 Aug; 20 Suppl 1():i200-7. PubMed ID: 15262800
[TBL] [Abstract][Full Text] [Related]
8. NetMatch: a Cytoscape plugin for searching biological networks.
Ferro A; Giugno R; Pigola G; Pulvirenti A; Skripin D; Bader GD; Shasha D
Bioinformatics; 2007 Apr; 23(7):910-2. PubMed ID: 17277332
[TBL] [Abstract][Full Text] [Related]
9. MedicCyc: a biochemical pathway database for Medicago truncatula.
Urbanczyk-Wochniak E; Sumner LW
Bioinformatics; 2007 Jun; 23(11):1418-23. PubMed ID: 17344243
[TBL] [Abstract][Full Text] [Related]
10. VitaPad: visualization tools for the analysis of pathway data.
Holford M; Li N; Nadkarni P; Zhao H
Bioinformatics; 2005 Apr; 21(8):1596-602. PubMed ID: 15564306
[TBL] [Abstract][Full Text] [Related]
11. Learning kernels from biological networks by maximizing entropy.
Tsuda K; Noble WS
Bioinformatics; 2004 Aug; 20 Suppl 1():i326-33. PubMed ID: 15262816
[TBL] [Abstract][Full Text] [Related]
12. Design and implementation of a tool for translating SBML into the biochemical stochastic pi-calculus.
Eccher C; Priami C
Bioinformatics; 2006 Dec; 22(24):3075-81. PubMed ID: 17046974
[TBL] [Abstract][Full Text] [Related]
13. Fitting a geometric graph to a protein-protein interaction network.
Higham DJ; Rasajski M; Przulj N
Bioinformatics; 2008 Apr; 24(8):1093-9. PubMed ID: 18344248
[TBL] [Abstract][Full Text] [Related]
14. Mining coherent dense subgraphs across massive biological networks for functional discovery.
Hu H; Yan X; Huang Y; Han J; Zhou XJ
Bioinformatics; 2005 Jun; 21 Suppl 1():i213-21. PubMed ID: 15961460
[TBL] [Abstract][Full Text] [Related]
15. A model diagram layout extension for SBML.
Gauges R; Rost U; Sahle S; Wegner K
Bioinformatics; 2006 Aug; 22(15):1879-85. PubMed ID: 16709586
[TBL] [Abstract][Full Text] [Related]
16. Rintact: enabling computational analysis of molecular interaction data from the IntAct repository.
Chiang T; Li N; Orchard S; Kerrien S; Hermjakob H; Gentleman R; Huber W
Bioinformatics; 2008 Apr; 24(8):1100-1. PubMed ID: 17989096
[TBL] [Abstract][Full Text] [Related]
17. TreePlus: interactive exploration of networks with enhanced tree layouts.
Lee B; Parr CS; Plaisant C; Bederson BB; Veksler VD; Gray WD; Kotfila C
IEEE Trans Vis Comput Graph; 2006; 12(6):1414-26. PubMed ID: 17073365
[TBL] [Abstract][Full Text] [Related]
18. Estimating node degree in bait-prey graphs.
Scholtens D; Chiang T; Huber W; Gentleman R
Bioinformatics; 2008 Jan; 24(2):218-24. PubMed ID: 18025006
[TBL] [Abstract][Full Text] [Related]
19. PathCase: pathways database system.
Elliott B; Kirac M; Cakmak A; Yavas G; Mayes S; Cheng E; Wang Y; Gupta C; Ozsoyoglu G; Meral Ozsoyoglu Z
Bioinformatics; 2008 Nov; 24(21):2526-33. PubMed ID: 18728044
[TBL] [Abstract][Full Text] [Related]
20. PuReD-MCL: a graph-based PubMed document clustering methodology.
Theodosiou T; Darzentas N; Angelis L; Ouzounis CA
Bioinformatics; 2008 Sep; 24(17):1935-41. PubMed ID: 18593717
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]