These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

264 related articles for article (PubMed ID: 17113702)

  • 21. Predicting protein stability changes upon mutation using database-derived potentials: solvent accessibility determines the importance of local versus non-local interactions along the sequence.
    Gilis D; Rooman M
    J Mol Biol; 1997 Sep; 272(2):276-90. PubMed ID: 9299354
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Effects of Zn(II) binding and apoprotein structural stability on the conformation change of designed antennafinger proteins.
    Hori Y; Sugiura Y
    Biochemistry; 2004 Mar; 43(11):3068-74. PubMed ID: 15023058
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Predicting changes in the stability of proteins and protein complexes: a study of more than 1000 mutations.
    Guerois R; Nielsen JE; Serrano L
    J Mol Biol; 2002 Jul; 320(2):369-87. PubMed ID: 12079393
    [TBL] [Abstract][Full Text] [Related]  

  • 24. CUPSAT: prediction of protein stability upon point mutations.
    Parthiban V; Gromiha MM; Schomburg D
    Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W239-42. PubMed ID: 16845001
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Classification of conformational stability of protein mutants from 3D pseudo-folding graph representation of protein sequences using support vector machines.
    Fernández M; Caballero J; Fernández L; Abreu JI; Acosta G
    Proteins; 2008 Jan; 70(1):167-75. PubMed ID: 17654549
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Can contact potentials reliably predict stability of proteins?
    Khatun J; Khare SD; Dokholyan NV
    J Mol Biol; 2004 Mar; 336(5):1223-38. PubMed ID: 15037081
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Robust prediction of mutation-induced protein stability change by property encoding of amino acids.
    Kang S; Chen G; Xiao G
    Protein Eng Des Sel; 2009 Feb; 22(2):75-83. PubMed ID: 19054789
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Testing hypotheses about determinants of protein structure with high-precision, high-throughput stability measurements and statistical modeling.
    Yi F; Sims DA; Pielak GJ; Edgell MH
    Biochemistry; 2003 Jun; 42(24):7594-603. PubMed ID: 12809516
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Statistical geometry based prediction of nonsynonymous SNP functional effects using random forest and neuro-fuzzy classifiers.
    Barenboim M; Masso M; Vaisman II; Jamison DC
    Proteins; 2008 Jun; 71(4):1930-9. PubMed ID: 18186470
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Assessing computational methods for predicting protein stability upon mutation: good on average but not in the details.
    Potapov V; Cohen M; Schreiber G
    Protein Eng Des Sel; 2009 Sep; 22(9):553-60. PubMed ID: 19561092
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Accurate stabilities of laccase mutants predicted with a modified FoldX protocol.
    Christensen NJ; Kepp KP
    J Chem Inf Model; 2012 Nov; 52(11):3028-42. PubMed ID: 23102044
    [TBL] [Abstract][Full Text] [Related]  

  • 32. iPTREE-STAB: interpretable decision tree based method for predicting protein stability changes upon mutations.
    Huang LT; Gromiha MM; Ho SY
    Bioinformatics; 2007 May; 23(10):1292-3. PubMed ID: 17379687
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Fast and accurate predictions of protein stability changes upon mutations using statistical potentials and neural networks: PoPMuSiC-2.0.
    Dehouck Y; Grosfils A; Folch B; Gilis D; Bogaerts P; Rooman M
    Bioinformatics; 2009 Oct; 25(19):2537-43. PubMed ID: 19654118
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Energetic analysis of an antigen/antibody interface: alanine scanning mutagenesis and double mutant cycles on the HyHEL-10/lysozyme interaction.
    Pons J; Rajpal A; Kirsch JF
    Protein Sci; 1999 May; 8(5):958-68. PubMed ID: 10338006
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Importance of individual side chains for the stability of a protein fold: computational alanine scanning of the insulin monomer.
    Zoete V; Meuwly M
    J Comput Chem; 2006 Nov; 27(15):1843-57. PubMed ID: 16981237
    [TBL] [Abstract][Full Text] [Related]  

  • 36. A C alpha-H...O hydrogen bond in a membrane protein is not stabilizing.
    Yohannan S; Faham S; Yang D; Grosfeld D; Chamberlain AK; Bowie JU
    J Am Chem Soc; 2004 Mar; 126(8):2284-5. PubMed ID: 14982414
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Support Vector Machine-based classification of protein folds using the structural properties of amino acid residues and amino acid residue pairs.
    Shamim MT; Anwaruddin M; Nagarajaram HA
    Bioinformatics; 2007 Dec; 23(24):3320-7. PubMed ID: 17989092
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Solvent-exposed residues located in the beta-sheet modulate the stability of the tetramerization domain of p53--a structural and combinatorial approach.
    Mora P; Carbajo RJ; Pineda-Lucena A; Sánchez del Pino MM; Pérez-Payá E
    Proteins; 2008 Jun; 71(4):1670-85. PubMed ID: 18076077
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Stability for function trade-offs in the enolase superfamily "catalytic module".
    Nagatani RA; Gonzalez A; Shoichet BK; Brinen LS; Babbitt PC
    Biochemistry; 2007 Jun; 46(23):6688-95. PubMed ID: 17503785
    [TBL] [Abstract][Full Text] [Related]  

  • 40. The stability of transmembrane helix interactions measured in a biological membrane.
    Finger C; Volkmer T; Prodöhl A; Otzen DE; Engelman DM; Schneider D
    J Mol Biol; 2006 May; 358(5):1221-8. PubMed ID: 16574146
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 14.