464 related articles for article (PubMed ID: 17137592)
1. The transition state of the ras binding domain of Raf is structurally polarized based on Phi-values but is energetically diffuse.
Campbell-Valois FX; Michnick SW
J Mol Biol; 2007 Feb; 365(5):1559-77. PubMed ID: 17137592
[TBL] [Abstract][Full Text] [Related]
2. Massive sequence perturbation of the Raf ras binding domain reveals relationships between sequence conservation, secondary structure propensity, hydrophobic core organization and stability.
Campbell-Valois FX; Tarassov K; Michnick SW
J Mol Biol; 2006 Sep; 362(1):151-71. PubMed ID: 16916524
[TBL] [Abstract][Full Text] [Related]
3. raf RBD and ubiquitin proteins share similar folds, folding rates and mechanisms despite having unrelated amino acid sequences.
Vallée-Bélisle A; Turcotte JF; Michnick SW
Biochemistry; 2004 Jul; 43(26):8447-58. PubMed ID: 15222756
[TBL] [Abstract][Full Text] [Related]
4. Nuclear magnetic resonance and molecular dynamics studies on the interactions of the Ras-binding domain of Raf-1 with wild-type and mutant Ras proteins.
Terada T; Ito Y; Shirouzu M; Tateno M; Hashimoto K; Kigawa T; Ebisuzaki T; Takio K; Shibata T; Yokoyama S; Smith BO; Laue ED; Cooper JA
J Mol Biol; 1999 Feb; 286(1):219-32. PubMed ID: 9931261
[TBL] [Abstract][Full Text] [Related]
5. Mutational analysis of the folding transition state of the C-terminal domain of ribosomal protein L9: a protein with an unusual beta-sheet topology.
Li Y; Gupta R; Cho JH; Raleigh DP
Biochemistry; 2007 Jan; 46(4):1013-21. PubMed ID: 17240985
[TBL] [Abstract][Full Text] [Related]
6. Structure determination of the Ras-binding domain of the Ral-specific guanine nucleotide exchange factor Rlf.
Esser D; Bauer B; Wolthuis RM; Wittinghofer A; Cool RH; Bayer P
Biochemistry; 1998 Sep; 37(39):13453-62. PubMed ID: 9753431
[TBL] [Abstract][Full Text] [Related]
7. Protein-protein recognition: an experimental and computational study of the R89K mutation in Raf and its effect on Ras binding.
Zeng J; Fridman M; Maruta H; Treutlein HR; Simonson T
Protein Sci; 1999 Jan; 8(1):50-64. PubMed ID: 10210183
[TBL] [Abstract][Full Text] [Related]
8. Conformational plasticity in folding of the split beta-alpha-beta protein S6: evidence for burst-phase disruption of the native state.
Otzen DE; Oliveberg M
J Mol Biol; 2002 Apr; 317(4):613-27. PubMed ID: 11955013
[TBL] [Abstract][Full Text] [Related]
9. Differences in the folding transition state of ubiquitin indicated by phi and psi analyses.
Sosnick TR; Dothager RS; Krantz BA
Proc Natl Acad Sci U S A; 2004 Dec; 101(50):17377-82. PubMed ID: 15576508
[TBL] [Abstract][Full Text] [Related]
10. Differential stabilization of two hydrophobic cores in the transition state of the villin 14T folding reaction.
Choe SE; Li L; Matsudaira PT; Wagner G; Shakhnovich EI
J Mol Biol; 2000 Nov; 304(1):99-115. PubMed ID: 11071813
[TBL] [Abstract][Full Text] [Related]
11. Stiffness of the distal loop restricts the structural heterogeneity of the transition state ensemble in SH3 domains.
Klimov DK; Thirumalai D
J Mol Biol; 2002 Apr; 317(5):721-37. PubMed ID: 11955020
[TBL] [Abstract][Full Text] [Related]
12. Engineering stabilising beta-sheet interactions into a conformationally flexible region of the folding transition state of ubiquitin.
Bofill R; Searle MS
J Mol Biol; 2005 Oct; 353(2):373-84. PubMed ID: 16169558
[TBL] [Abstract][Full Text] [Related]
13. Understanding the mechanism of beta-hairpin folding via phi-value analysis.
Du D; Tucker MJ; Gai F
Biochemistry; 2006 Feb; 45(8):2668-78. PubMed ID: 16489760
[TBL] [Abstract][Full Text] [Related]
14. Ubiquitin folds through a highly polarized transition state.
Went HM; Jackson SE
Protein Eng Des Sel; 2005 May; 18(5):229-37. PubMed ID: 15857839
[TBL] [Abstract][Full Text] [Related]
15. Molecular dynamics simulations of the Ras:Raf and Rap:Raf complexes.
Zeng J; Treutlein HR; Simonson T
Proteins; 1999 Apr; 35(1):89-100. PubMed ID: 10090289
[TBL] [Abstract][Full Text] [Related]
16. Determination of the transition state ensemble for the folding of ubiquitin from a combination of Phi and Psi analyses.
Várnai P; Dobson CM; Vendruscolo M
J Mol Biol; 2008 Mar; 377(2):575-88. PubMed ID: 18262544
[TBL] [Abstract][Full Text] [Related]
17. Structural examination of phi-value analysis in protein folding.
Feng H; Vu ND; Zhou Z; Bai Y
Biochemistry; 2004 Nov; 43(45):14325-31. PubMed ID: 15533036
[TBL] [Abstract][Full Text] [Related]
18. In vitro inhibition of Ras-Raf association by short peptides.
Barnard D; Sun H; Baker L; Marshall MS
Biochem Biophys Res Commun; 1998 Jun; 247(1):176-80. PubMed ID: 9636675
[TBL] [Abstract][Full Text] [Related]
19. Structure of the transition state in the folding process of human procarboxypeptidase A2 activation domain.
Villegas V; Martínez JC; Avilés FX; Serrano L
J Mol Biol; 1998 Nov; 283(5):1027-36. PubMed ID: 9799641
[TBL] [Abstract][Full Text] [Related]
20. Fine structure analysis of a protein folding transition state; distinguishing between hydrophobic stabilization and specific packing.
Anil B; Sato S; Cho JH; Raleigh DP
J Mol Biol; 2005 Dec; 354(3):693-705. PubMed ID: 16246369
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]