481 related articles for article (PubMed ID: 17138585)
1. BioNetBuilder: automatic integration of biological networks.
Avila-Campillo I; Drew K; Lin J; Reiss DJ; Bonneau R
Bioinformatics; 2007 Feb; 23(3):392-3. PubMed ID: 17138585
[TBL] [Abstract][Full Text] [Related]
2. NetMatch: a Cytoscape plugin for searching biological networks.
Ferro A; Giugno R; Pigola G; Pulvirenti A; Skripin D; Bader GD; Shasha D
Bioinformatics; 2007 Apr; 23(7):910-2. PubMed ID: 17277332
[TBL] [Abstract][Full Text] [Related]
3. The MiSink Plugin: Cytoscape as a graphical interface to the Database of Interacting Proteins.
Salwinski L; Eisenberg D
Bioinformatics; 2007 Aug; 23(16):2193-5. PubMed ID: 17553858
[TBL] [Abstract][Full Text] [Related]
4. BiNoM: a Cytoscape plugin for manipulating and analyzing biological networks.
Zinovyev A; Viara E; Calzone L; Barillot E
Bioinformatics; 2008 Mar; 24(6):876-7. PubMed ID: 18024474
[TBL] [Abstract][Full Text] [Related]
5. WebCell: a web-based environment for kinetic modeling and dynamic simulation of cellular networks.
Lee DY; Yun C; Cho A; Hou BK; Park S; Lee SY
Bioinformatics; 2006 May; 22(9):1150-1. PubMed ID: 16543278
[TBL] [Abstract][Full Text] [Related]
6. GOlorize: a Cytoscape plug-in for network visualization with Gene Ontology-based layout and coloring.
Garcia O; Saveanu C; Cline M; Fromont-Racine M; Jacquier A; Schwikowski B; Aittokallio T
Bioinformatics; 2007 Feb; 23(3):394-6. PubMed ID: 17127678
[TBL] [Abstract][Full Text] [Related]
7. PATIKAweb: a Web interface for analyzing biological pathways through advanced querying and visualization.
Dogrusoz U; Erson EZ; Giral E; Demir E; Babur O; Cetintas A; Colak R
Bioinformatics; 2006 Feb; 22(3):374-5. PubMed ID: 16287939
[TBL] [Abstract][Full Text] [Related]
8. Cerebral: a Cytoscape plugin for layout of and interaction with biological networks using subcellular localization annotation.
Barsky A; Gardy JL; Hancock RE; Munzner T
Bioinformatics; 2007 Apr; 23(8):1040-2. PubMed ID: 17309895
[TBL] [Abstract][Full Text] [Related]
9. VitaPad: visualization tools for the analysis of pathway data.
Holford M; Li N; Nadkarni P; Zhao H
Bioinformatics; 2005 Apr; 21(8):1596-602. PubMed ID: 15564306
[TBL] [Abstract][Full Text] [Related]
10. GenePro: a Cytoscape plug-in for advanced visualization and analysis of interaction networks.
Vlasblom J; Wu S; Pu S; Superina M; Liu G; Orsi C; Wodak SJ
Bioinformatics; 2006 Sep; 22(17):2178-9. PubMed ID: 16921162
[TBL] [Abstract][Full Text] [Related]
11. The tYNA platform for comparative interactomics: a web tool for managing, comparing and mining multiple networks.
Yip KY; Yu H; Kim PM; Schultz M; Gerstein M
Bioinformatics; 2006 Dec; 22(23):2968-70. PubMed ID: 17021160
[TBL] [Abstract][Full Text] [Related]
12. BisoGenet: a new tool for gene network building, visualization and analysis.
Martin A; Ochagavia ME; Rabasa LC; Miranda J; Fernandez-de-Cossio J; Bringas R
BMC Bioinformatics; 2010 Feb; 11():91. PubMed ID: 20163717
[TBL] [Abstract][Full Text] [Related]
13. A query language for biological networks.
Leser U
Bioinformatics; 2005 Sep; 21 Suppl 2():ii33-9. PubMed ID: 16204121
[TBL] [Abstract][Full Text] [Related]
14. jSquid: a Java applet for graphical on-line network exploration.
Klammer M; Roopra S; Sonnhammer EL
Bioinformatics; 2008 Jun; 24(12):1467-8. PubMed ID: 18445606
[TBL] [Abstract][Full Text] [Related]
15. Cytoscape ESP: simple search of complex biological networks.
Ashkenazi M; Bader GD; Kuchinsky A; Moshelion M; States DJ
Bioinformatics; 2008 Jun; 24(12):1465-6. PubMed ID: 18445605
[TBL] [Abstract][Full Text] [Related]
16. BioNetBuilder2.0: bringing systems biology to chicken and other model organisms.
Konieczka JH; Drew K; Pine A; Belasco K; Davey S; Yatskievych TA; Bonneau R; Antin PB
BMC Genomics; 2009 Jul; 10 Suppl 2(Suppl 2):S6. PubMed ID: 19607657
[TBL] [Abstract][Full Text] [Related]
17. BiNGO: a Cytoscape plugin to assess overrepresentation of gene ontology categories in biological networks.
Maere S; Heymans K; Kuiper M
Bioinformatics; 2005 Aug; 21(16):3448-9. PubMed ID: 15972284
[TBL] [Abstract][Full Text] [Related]
18. APID2NET: unified interactome graphic analyzer.
Hernandez-Toro J; Prieto C; De las Rivas J
Bioinformatics; 2007 Sep; 23(18):2495-7. PubMed ID: 17644818
[TBL] [Abstract][Full Text] [Related]
19. Analyzing networks with VisANT.
Hu Z; Mellor J; DeLisi C
Curr Protoc Bioinformatics; 2004 Dec; Chapter 8():Unit 8.8. PubMed ID: 18428738
[TBL] [Abstract][Full Text] [Related]
20. Fast grid layout algorithm for biological networks with sweep calculation.
Kojima K; Nagasaki M; Miyano S
Bioinformatics; 2008 Jun; 24(12):1433-41. PubMed ID: 18424458
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
