BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

301 related articles for article (PubMed ID: 17142240)

  • 1. A Protein Classification Benchmark collection for machine learning.
    Sonego P; Pacurar M; Dhir S; Kertész-Farkas A; Kocsor A; Gáspári Z; Leunissen JA; Pongor S
    Nucleic Acids Res; 2007 Jan; 35(Database issue):D232-6. PubMed ID: 17142240
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Benchmarking protein classification algorithms via supervised cross-validation.
    Kertész-Farkas A; Dhir S; Sonego P; Pacurar M; Netoteia S; Nijveen H; Kuzniar A; Leunissen JA; Kocsor A; Pongor S
    J Biochem Biophys Methods; 2008 Apr; 70(6):1215-23. PubMed ID: 17604112
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Supervised machine learning algorithms for protein structure classification.
    Jain P; Garibaldi JM; Hirst JD
    Comput Biol Chem; 2009 Jun; 33(3):216-23. PubMed ID: 19473879
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Accurate prediction of solvent accessibility using neural networks-based regression.
    Adamczak R; Porollo A; Meller J
    Proteins; 2004 Sep; 56(4):753-67. PubMed ID: 15281128
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Global sequence properties for superfamily prediction: a machine learning approach.
    Dobson RJ; Munroe PB; Caulfield MJ; Saqi MA
    J Integr Bioinform; 2009 Aug; 6(1):109. PubMed ID: 20134076
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Protein classification with imbalanced data.
    Zhao XM; Li X; Chen L; Aihara K
    Proteins; 2008 Mar; 70(4):1125-32. PubMed ID: 18076026
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Fast model-based protein homology detection without alignment.
    Hochreiter S; Heusel M; Obermayer K
    Bioinformatics; 2007 Jul; 23(14):1728-36. PubMed ID: 17488755
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Variable predictive model based classification algorithm for effective separation of protein structural classes.
    Raghuraj R; Lakshminarayanan S
    Comput Biol Chem; 2008 Aug; 32(4):302-6. PubMed ID: 18462997
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Classification and knowledge discovery in protein databases.
    Radivojac P; Chawla NV; Dunker AK; Obradovic Z
    J Biomed Inform; 2004 Aug; 37(4):224-39. PubMed ID: 15465476
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Inferring boundary information of discontinuous-domain proteins.
    Sikder AR; Zomaya AY
    IEEE Trans Nanobioscience; 2008 Sep; 7(3):200-5. PubMed ID: 18779100
    [TBL] [Abstract][Full Text] [Related]  

  • 11. TMBETA-GENOME: database for annotated beta-barrel membrane proteins in genomic sequences.
    Gromiha MM; Yabuki Y; Kundu S; Suharnan S; Suwa M
    Nucleic Acids Res; 2007 Jan; 35(Database issue):D314-6. PubMed ID: 17088282
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Statistical geometry based prediction of nonsynonymous SNP functional effects using random forest and neuro-fuzzy classifiers.
    Barenboim M; Masso M; Vaisman II; Jamison DC
    Proteins; 2008 Jun; 71(4):1930-9. PubMed ID: 18186470
    [TBL] [Abstract][Full Text] [Related]  

  • 13. AutoSCOP: automated prediction of SCOP classifications using unique pattern-class mappings.
    Gewehr JE; Hintermair V; Zimmer R
    Bioinformatics; 2007 May; 23(10):1203-10. PubMed ID: 17379694
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Comparison of sequence and structure-based datasets for nonredundant structural data mining.
    Chu CK; Feng LL; Wouters MA
    Proteins; 2005 Sep; 60(4):577-83. PubMed ID: 16001417
    [TBL] [Abstract][Full Text] [Related]  

  • 15. SVM-HUSTLE--an iterative semi-supervised machine learning approach for pairwise protein remote homology detection.
    Shah AR; Oehmen CS; Webb-Robertson BJ
    Bioinformatics; 2008 Mar; 24(6):783-90. PubMed ID: 18245127
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Prediction of protein folds: extraction of new features, dimensionality reduction, and fusion of heterogeneous classifiers.
    Ghanty P; Pal NR
    IEEE Trans Nanobioscience; 2009 Mar; 8(1):100-10. PubMed ID: 19278932
    [TBL] [Abstract][Full Text] [Related]  

  • 17. A high level interface to SCOP and ASTRAL implemented in python.
    Casbon JA; Crooks GE; Saqi MA
    BMC Bioinformatics; 2006 Jan; 7():10. PubMed ID: 16403221
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Evaluation of protein fold comparison servers.
    Novotny M; Madsen D; Kleywegt GJ
    Proteins; 2004 Feb; 54(2):260-70. PubMed ID: 14696188
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Multiple classifier integration for the prediction of protein structural classes.
    Chen L; Lu L; Feng K; Li W; Song J; Zheng L; Yuan Y; Zeng Z; Feng K; Lu W; Cai Y
    J Comput Chem; 2009 Nov; 30(14):2248-54. PubMed ID: 19274708
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Support vector machine learning from heterogeneous data: an empirical analysis using protein sequence and structure.
    Lewis DP; Jebara T; Noble WS
    Bioinformatics; 2006 Nov; 22(22):2753-60. PubMed ID: 16966363
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 16.