BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

114 related articles for article (PubMed ID: 17151779)

  • 1. EMMA: an efficient massive mapping algorithm using improved approximate mapping filtering.
    Zhang X; Cao ZW; Lin ZX; Wang QK; Li YX
    Acta Biochim Biophys Sin (Shanghai); 2006 Dec; 38(12):857-64. PubMed ID: 17151779
    [TBL] [Abstract][Full Text] [Related]  

  • 2. htSNPer1.0: software for haplotype block partition and htSNPs selection.
    Ding K; Zhang J; Zhou K; Shen Y; Zhang X
    BMC Bioinformatics; 2005 Mar; 6():38. PubMed ID: 15740612
    [TBL] [Abstract][Full Text] [Related]  

  • 3. A fast and efficient algorithm for mapping short sequences to a reference genome.
    Antoniou P; Iliopoulos CS; Mouchard L; Pissis SP
    Adv Exp Med Biol; 2010; 680():399-403. PubMed ID: 20865524
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Hardware accelerator for genomic sequence alignment.
    Chiang J; Studniberg M; Shaw J; Seto S; Truong K
    Conf Proc IEEE Eng Med Biol Soc; 2006; 2006():5787-9. PubMed ID: 17946720
    [TBL] [Abstract][Full Text] [Related]  

  • 5. GMAP and GSNAP for Genomic Sequence Alignment: Enhancements to Speed, Accuracy, and Functionality.
    Wu TD; Reeder J; Lawrence M; Becker G; Brauer MJ
    Methods Mol Biol; 2016; 1418():283-334. PubMed ID: 27008021
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Heuristic reusable dynamic programming: efficient updates of local sequence alignment.
    Hong C; Tewfik AH
    IEEE/ACM Trans Comput Biol Bioinform; 2009; 6(4):570-82. PubMed ID: 19875856
    [TBL] [Abstract][Full Text] [Related]  

  • 7. cDNA2Genome: a tool for mapping and annotating cDNAs.
    Del Val C; Glatting KH; Suhai S
    BMC Bioinformatics; 2003 Sep; 4():39. PubMed ID: 12964951
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Refined repetitive sequence searches utilizing a fast hash function and cross species information retrievals.
    Reneker J; Shyu CR
    BMC Bioinformatics; 2005 May; 6():111. PubMed ID: 15869708
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Efficient decoding algorithms for generalized hidden Markov model gene finders.
    Majoros WH; Pertea M; Delcher AL; Salzberg SL
    BMC Bioinformatics; 2005 Jan; 6():16. PubMed ID: 15667658
    [TBL] [Abstract][Full Text] [Related]  

  • 10. PipMaker: a World Wide Web server for genomic sequence alignments.
    Elnitski L; Riemer C; Schwartz S; Hardison R; Miller W
    Curr Protoc Bioinformatics; 2003 Feb; Chapter 10():Unit 10.2. PubMed ID: 18428692
    [TBL] [Abstract][Full Text] [Related]  

  • 11. An exact algorithm for the zero exemplar breakpoint distance problem.
    Zhu D; Wang L
    IEEE/ACM Trans Comput Biol Bioinform; 2013; 10(6):1469-77. PubMed ID: 24407305
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Introduction to comparing large sequence sets.
    Page RD
    Curr Protoc Bioinformatics; 2003 Feb; Chapter 10():Unit 10.1. PubMed ID: 18428691
    [TBL] [Abstract][Full Text] [Related]  

  • 13. GASAT: a genetic local search algorithm for the satisfiability problem.
    Lardeux F; Saubion F; Hao JK
    Evol Comput; 2006; 14(2):223-53. PubMed ID: 16831107
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Accelerating read mapping with FastHASH.
    Xin H; Lee D; Hormozdiari F; Yedkar S; Mutlu O; Alkan C
    BMC Genomics; 2013; 14 Suppl 1(Suppl 1):S13. PubMed ID: 23369189
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Anatomy of a hash-based long read sequence mapping algorithm for next generation DNA sequencing.
    Misra S; Agrawal A; Liao WK; Choudhary A
    Bioinformatics; 2011 Jan; 27(2):189-95. PubMed ID: 21088030
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Efficient filtering methods for clustering cDNAs with spliced sequence alignment.
    Shibuya T; Kashima H; Konagaya A
    Bioinformatics; 2004 Jan; 20(1):29-39. PubMed ID: 14693805
    [TBL] [Abstract][Full Text] [Related]  

  • 17. pblat: a multithread blat algorithm speeding up aligning sequences to genomes.
    Wang M; Kong L
    BMC Bioinformatics; 2019 Jan; 20(1):28. PubMed ID: 30646844
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Perfect Hamming code with a hash table for faster genome mapping.
    Takenaka Y; Seno S; Matsuda H
    BMC Genomics; 2011 Nov; 12 Suppl 3(Suppl 3):S8. PubMed ID: 22369457
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Two Efficient Techniques to Find Approximate Overlaps between Sequences.
    Haj Rachid M
    Biomed Res Int; 2017; 2017():2731385. PubMed ID: 28293632
    [TBL] [Abstract][Full Text] [Related]  

  • 20. PromoterExplorer: an effective promoter identification method based on the AdaBoost algorithm.
    Xie X; Wu S; Lam KM; Yan H
    Bioinformatics; 2006 Nov; 22(22):2722-8. PubMed ID: 17000749
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 6.