BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

203 related articles for article (PubMed ID: 1715564)

  • 21. Calculation of protein conformation by the build-up procedure. Application to bovine pancreatic trypsin inhibitor using limited simulated nuclear magnetic resonance data.
    Vásquez M; Scheraga HA
    J Biomol Struct Dyn; 1988 Feb; 5(4):705-55. PubMed ID: 2482758
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Nuclear magnetic resonance solution structure of dendrotoxin K from the venom of Dendroaspis polylepis polylepis.
    Berndt KD; Güntert P; Wüthrich K
    J Mol Biol; 1993 Dec; 234(3):735-50. PubMed ID: 8254670
    [TBL] [Abstract][Full Text] [Related]  

  • 23. An improved protein decoy set for testing energy functions for protein structure prediction.
    Tsai J; Bonneau R; Morozov AV; Kuhlman B; Rohl CA; Baker D
    Proteins; 2003 Oct; 53(1):76-87. PubMed ID: 12945051
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Free energy landscapes of peptides by enhanced conformational sampling.
    Nakajima N; Higo J; Kidera A; Nakamura H
    J Mol Biol; 2000 Feb; 296(1):197-216. PubMed ID: 10656827
    [TBL] [Abstract][Full Text] [Related]  

  • 25. A new force field (ECEPP-05) for peptides, proteins, and organic molecules.
    Arnautova YA; Jagielska A; Scheraga HA
    J Phys Chem B; 2006 Mar; 110(10):5025-44. PubMed ID: 16526746
    [TBL] [Abstract][Full Text] [Related]  

  • 26. The use of NMR chemical shifts to analyse the MD trajectories: simulation of bovine pancreatic trypsin inhibitor dynamics in water as a test case for solvent influences.
    Busetta B; Picard P; Precigoux G
    J Pept Sci; 2003 Jul; 9(7):450-60. PubMed ID: 12916642
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Continuum electrostatic analysis of preferred solvation sites around proteins in solution.
    Dennis S; Camacho CJ; Vajda S
    Proteins; 2000 Feb; 38(2):176-88. PubMed ID: 10656264
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Folding of the villin headpiece subdomain from random structures. Analysis of the charge distribution as a function of pH.
    Ripoll DR; Vila JA; Scheraga HA
    J Mol Biol; 2004 Jun; 339(4):915-25. PubMed ID: 15165859
    [TBL] [Abstract][Full Text] [Related]  

  • 29. I-SOLV: a new surface-based empirical model for computing solvation free energies.
    Wang R; Lin F; Xu Y; Cheng T
    J Mol Graph Model; 2007 Jul; 26(1):368-77. PubMed ID: 17317248
    [TBL] [Abstract][Full Text] [Related]  

  • 30. A solvent model for simulations of peptides in bilayers. I. Membrane-promoting alpha-helix formation.
    Efremov RG; Nolde DE; Vergoten G; Arseniev AS
    Biophys J; 1999 May; 76(5):2448-59. PubMed ID: 10233062
    [TBL] [Abstract][Full Text] [Related]  

  • 31. NMR characterization of partially folded and unfolded conformational ensembles of proteins.
    Barbar E
    Biopolymers; 1999; 51(3):191-207. PubMed ID: 10516571
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Solution structure of an isolated antibody VL domain.
    Constantine KL; Friedrichs MS; Metzler WJ; Wittekind M; Hensley P; Mueller L
    J Mol Biol; 1994 Feb; 236(1):310-27. PubMed ID: 8107112
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Structural mining: self-consistent design on flexible protein-peptide docking and transferable binding affinity potential.
    Liu Z; Dominy BN; Shakhnovich EI
    J Am Chem Soc; 2004 Jul; 126(27):8515-28. PubMed ID: 15238009
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Combining a polarizable force-field and a coarse-grained polarizable solvent model: application to long dynamics simulations of bovine pancreatic trypsin inhibitor.
    Masella M; Borgis D; Cuniasse P
    J Comput Chem; 2008 Aug; 29(11):1707-24. PubMed ID: 18351600
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Variable-target-function and build-up procedures for the calculation of protein conformation. Application to bovine pancreatic trypsin inhibitor using limited simulated nuclear magnetic resonance data.
    Vásquez M; Scheraga HA
    J Biomol Struct Dyn; 1988 Feb; 5(4):757-84. PubMed ID: 2482759
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Solution structure of a sweet protein single-chain monellin determined by nuclear magnetic resonance and dynamical simulated annealing calculations.
    Lee SY; Lee JH; Chang HJ; Cho JM; Jung JW; Lee W
    Biochemistry; 1999 Feb; 38(8):2340-6. PubMed ID: 10029527
    [TBL] [Abstract][Full Text] [Related]  

  • 37. The solution conformations of ferrichrome and deferriferrichrome determined by 1H-NMR spectroscopy and computational modeling.
    Constantine KL; De Marco A; Madrid M; Brooks CL; Llinás M
    Biopolymers; 1990; 30(3-4):239-56. PubMed ID: 2279065
    [TBL] [Abstract][Full Text] [Related]  

  • 38. "Designing out" disulfide bonds: thermodynamic properties of 30-51 cystine substitution mutants of bovine pancreatic trypsin inhibitor.
    Liu Y; Breslauer K; Anderson S
    Biochemistry; 1997 May; 36(18):5323-35. PubMed ID: 9154914
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Structure of single-disulfide variants of bovine pancreatic trypsin inhibitor (BPTI) as probed by their binding to bovine beta-trypsin.
    Krokoszynska I; Dadlez M; Otlewski J
    J Mol Biol; 1998 Jan; 275(3):503-13. PubMed ID: 9466927
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Energy minimization of globular proteins with solvent effects included. Comparison of empirical solvation energy terms and explicit water treatment.
    Kierzek A; Zielenkiewicz P
    Acta Biochim Pol; 1997; 44(3):549-56. PubMed ID: 9511964
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 11.